PXEA_0003399101 (Protopolystoma xenopodis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 PXEA_0003399101 T235819_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.816 0.911
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.797 0.929
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.797 0.929
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.797 0.929
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.796 0.893
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.789 0.893
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.789 0.893
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.789 0.893
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.777 0.875
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.777 0.875
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.777 0.875
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.777 0.875
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.777 0.875
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.777 0.875
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PXEA_0003399101-mRNA-1 Homeodomain 4 62

Links

Other Homeodomain family TFs
Other Protopolystoma xenopodis TFs

391 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_189288 Agaricus bisporus AGABI2DRAFT_189288 N 0.000
BN946_scf184867.g15 Trametes cinnabarina BN946_scf184867.g15 N 0.000
BOTBODRAFT_56815 Botryobasidium botryosum BOTBODRAFT_56815 N 0.000
CC1G_00612 Coprinopsis cinerea CC1G_00612 N 0.000
CERSUDRAFT_110850 Ceriporiopsis subvermispora CERSUDRAFT_110850 N 0.000
fgenesh1_pg.C_scaffold_18000074 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_18000074 N 0.000
FIBRA_04336 Fibroporia radiculosa FIBRA_04336 I 0.000
GALMADRAFT_132473 Galerina marginata GALMADRAFT_132473 N 0.000
GLOTRDRAFT_134845 Gloeophyllum trabeum GLOTRDRAFT_134845 N 0.000
gw1.10.371.1 Mucor circinelloides gw1.10.371.1 I 0.000
gw1.26.106.1 Phycomyces blakesleeanus gw1.26.106.1 I 0.000
gw1.6.914.1 Mucor circinelloides gw1.6.914.1 I 0.000
HETIRDRAFT_431289 Heterobasidion irregulare HETIRDRAFT_431289 N 0.000
JAAARDRAFT_44019 Jaapia argillacea JAAARDRAFT_44019 N 0.000
K443DRAFT_105165 Laccaria amethystina K443DRAFT_105165 I 0.000
K443DRAFT_677749 Laccaria amethystina K443DRAFT_677749 N 0.000
LACBIDRAFT_297628 Laccaria bicolor LACBIDRAFT_297628 N 0.000
M378DRAFT_174679 Amanita muscaria M378DRAFT_174679 N 0.000
M404DRAFT_137431 Pisolithus tinctorius M404DRAFT_137431 N 0.000
M407DRAFT_128179 Tulasnella calospora M407DRAFT_128179 N 0.000
M413DRAFT_6767 Hebeloma cylindrosporum M413DRAFT_6767 N 0.000
PAXINDRAFT_100475 Paxillus involutus PAXINDRAFT_100475 N 0.000
PAXRUDRAFT_824657 Paxillus rubicundulus PAXRUDRAFT_824657 N 0.000
PHACADRAFT_204947 Phanerochaete carnosa PHACADRAFT_204947 N 0.000
PHLGIDRAFT_50338 Phlebiopsis gigantea PHLGIDRAFT_50338 N 0.000
PILCRDRAFT_101484 Piloderma croceum PILCRDRAFT_101484 N 0.000
PISMIDRAFT_671894 Pisolithus microcarpus PISMIDRAFT_671894 N 0.000
PLEOSDRAFT_1075550 Pleurotus ostreatus PLEOSDRAFT_1075550 I 0.000
POSPLDRAFT_106191 Postia placenta POSPLDRAFT_106191 N 0.000
RO3G_01863 Rhizopus oryzae RO3G_01863 I 0.000
RO3G_04480 Rhizopus oryzae RO3G_04480 I 0.000
RO3G_11070 Rhizopus oryzae RO3G_11070 N 0.000
RO3G_14851 Rhizopus oryzae RO3G_14851 I 0.000
SCHCODRAFT_238623 Schizophyllum commune SCHCODRAFT_238623 I 0.000
SCLCIDRAFT_119671 Scleroderma citrinum SCLCIDRAFT_119671 N 0.000
SERLA73DRAFT_78978 Serpula lacrymans SERLA73DRAFT_78978 N 0.000
SPPG_03931 Spizellomyces punctatus SPPG_03931 I 0.000
SPPG_06166 Spizellomyces punctatus SPPG_06166 I 0.000