TsM_000262600 (Taenia solium)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 TsM_000262600 T237042_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.700 0.709
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.656 0.691
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.656 0.691
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.656 0.691
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.656 0.691
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.656 0.691
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.656 0.691
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.656 0.691
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.656 0.673
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.656 0.673
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.656 0.673
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.656 0.673
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.656 0.673
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.656 0.673
CBG08197
M02064_2.00 		Caenorhabditis briggsae
NNDACDNN
NNHGTHNN		 PBM
Weirauch et al.(2014)
pTH6408 		0.642 0.673
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TsM_000262600 Homeodomain 187 244

Links

Other Homeodomain family TFs
Other Taenia solium TFs

381 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AEPI011200 Anopheles epiroticus AEPI011200 N 0.000
BGLB002715 Biomphalaria glabrata BGLB002715 N 0.000
Cmyd_10014184 Chelonia mydas Cmyd_10014184 I 0.000
Cmyd_10017545 Chelonia mydas Cmyd_10017545 N 0.000
DAPPUDRAFT_241731 Daphnia pulex DAPPUDRAFT_241731 N 0.000
EFV52052 Trichinella spiralis EFV52052 N 0.000
ENSAMEG00000015014 Ailuropoda melanoleuca ENSAMEG00000015014 I 0.000
ENSBTAG00000003540 Bos taurus ENSBTAG00000003540 I 0.000
ST18 Callithrix jacchus ENSCJAG00000014630 N 0.000
ST18 Homo sapiens ENSG00000147488 I 0.000
MYT1L Homo sapiens ENSG00000186487 I 0.000
ENSLACG00000008399 Latimeria chalumnae ENSLACG00000008399 I 0.000
MYT1L Macaca mulatta ENSMMUG00000009310 I 0.000
ENSPMAG00000002519 Petromyzon marinus ENSPMAG00000002519 N 0.000
ENSXMAG00000007322 Xiphophorus maculatus ENSXMAG00000007322 N 0.000
nRc.2.0.1.g46521 Romanomermis culicivorax nRc.2.0.1.g46521 N 0.000
Ogr11018 Ophisaurus gracilis Ogr11018 N 0.000