GPUH_0001175501 (Gongylonema pulchrum)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 GPUH_0001175501 T243673_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
hsf-1
M00682_2.00 		Caenorhabditis elegans
TTCYAGAA
TTCTRGAA		 PBM
Narasimhan et al.(2015)
pTH10796 		0.409 0.621
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPUH_0001175501-mRNA-1 HSF 75 165

Links

Other HSF family TFs
Other Gongylonema pulchrum TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0000071501 Angiostrongylus costaricensis ACOC_0000071501 I 0.427
ALUE_0000801801 Ascaris lumbricoides ALUE_0000801801 I 0.479
ANCCAN_00795 Ancylostoma caninum ANCCAN_00795 I 0.428
ANCCEY_01944 Ancylostoma ceylanicum ANCCEY_01944 I 0.428
ASIM_0001223701 Anisakis simplex ASIM_0001223701 I 0.458
ASU_10106 Ascaris suum ASU_10106 I 0.479
Bm6746 Brugia malayi Bm6746 I 0.492
BTMF_0001609701 Brugia timori BTMF_0001609701 I 0.492
BXY_0882000 Bursaphelenchus xylophilus BXY_0882000 I 0.459
CBN21581 Caenorhabditis brenneri CBN21581 I 0.439
CRE28338 Caenorhabditis remanei CRE28338 I 0.438
DICVIV_08378 Dictyocaulus viviparus DICVIV_08378 I 0.429
DME_0000290701 Dracunculus medinensis DME_0000290701 I 0.328
EEL_0000787901 Elaeophora elaphi EEL_0000787901 I 0.473
EVEC_0000124901 Enterobius vermicularis EVEC_0000124901 I 0.447
GPLIN_000109700 Globodera pallida GPLIN_000109700 I 0.403
GPLIN_000673800 Globodera pallida GPLIN_000673800 I 0.403
HCOI00423400 Haemonchus contortus HCOI00423400 I 0.429
HCOI00424600 Haemonchus contortus HCOI00424600 I 0.429
LOAG_08901 Loa loa LOAG_08901 I 0.486
MhA1_Contig1076.frz3.gene4 Meloidogyne hapla MhA1_Contig1076.frz3.gene4 I 0.452
Minc16435 Meloidogyne incognita Minc16435 I 0.454
nAv.1.0.1.g08619 Acanthocheilonema viteae nAv.1.0.1.g08619 I 0.492
NBR_0001979501 Nippostrongylus brasiliensis NBR_0001979501 I 0.410
nDi.2.2.2.g05157 Dirofilaria immitis nDi.2.2.2.g05157 I 0.492
nLs.2.1.2.g08921 Litomosoides sigmodontis nLs.2.1.2.g08921 I 0.503
nOo.2.0.1.g06259 Onchocerca ochengi nOo.2.0.1.g06259 I 0.492
nRc.2.0.1.g30983 Romanomermis culicivorax nRc.2.0.1.g30983 I 0.321
PTRK_0000997100 Parastrongyloides trichosuri PTRK_0000997100 I 0.330
PTRK_0001079800 Parastrongyloides trichosuri PTRK_0001079800 I 0.354
RSKR_0000052100 Rhabditophanes kr3021 RSKR_0000052100 I 0.333
SMUV_0000043201 Syphacia muris SMUV_0000043201 I 0.427
snap_masked-nMf.1.1.scaf11979-processed-gene-0.4 Meloidogyne floridensis snap_masked-nMf.1.1.scaf11979-processed-gene-0.4 I 0.452
SPAL_0000387400 Strongyloides papillosus SPAL_0000387400 I 0.361
SPAL_0001635100 Strongyloides papillosus SPAL_0001635100 I 0.321
SSTP_0000347800 Strongyloides stercoralis SSTP_0000347800 I 0.362
SVE_0431600 Strongyloides venezuelensis SVE_0431600 I 0.324
SVE_1155700 Strongyloides venezuelensis SVE_1155700 I 0.357
SVUK_0000175201 Strongylus vulgaris SVUK_0000175201 I 0.428
TCLT_0000441901 Thelazia callipaeda TCLT_0000441901 I 0.479
TCNE_0000949901 Toxocara canis TCNE_0000949901 I 0.479
hsf-1 Caenorhabditis elegans WBGene00002004 D 0.409
WBGene00238233 Onchocerca volvulus WBGene00238233 I 0.492