ENSGMOG00000007264 (Gadus morhua)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSGMOG00000007264 T244120_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF6
M02254_2.00 		Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN		 PBM
Weirauch et al.(2014)
pTH9210 		0.817 0.817
IRF6
M02253_2.00 		Gallus gallus
NNMCNAAWNN
NNWTTNGKNN		 PBM
Weirauch et al.(2014)
pTH9178 		0.808 0.808
irf6.2
M02259_2.00 		Xenopus tropicalis
NVNHGAWACH
DGTWTCDNBN		 PBM
Weirauch et al.(2014)
pTH9302 		0.808 0.808
Irf6
M00176_2.00 		Mus musculus
NNNHGADASN
NSTHTCDNNN		 PBM
Badis et al.(2009)
Irf6_3803 		0.788 0.788
IRF6
M05527_2.00 		Homo sapiens
RGTWTCGNNNNNNYGAWACY
RGTWTCRNNNNNNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_HT-SELEX 		0.788 0.788
IRF6
M05529_2.00 		Homo sapiens
ACCGAAACT
AGTTTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_HT-SELEX 		0.788 0.788
IRF6
M05528_2.00 		Homo sapiens
RGTWTCGNHNNDNYGAWACY
RGTWTCRNHNNDNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_Methyl-HT-SELEX 		0.788 0.788
IRF6
M05530_2.00 		Homo sapiens
ACCGAWACY
RGTWTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_Methyl-HT-SELEX 		0.788 0.788
irf5.L
M02260_2.00 		Xenopus laevis
VNCGADACHN
NDGTHTCGNB		 PBM
Weirauch et al.(2014)
pTH9367 		0.769 0.769
Irf5
M00177_2.00 		Mus musculus
NNNHGADASH
DSTHTCDNNN		 PBM
Badis et al.(2009)
Irf5_3874 		0.740 0.740
IRF5
M02256_2.00 		Oryctolagus cuniculus
NHCGAAACYN
NRGTTTCGDN		 PBM
Weirauch et al.(2014)
pTH9272 		0.740 0.740
IRF5
M03332_2.00 		Homo sapiens
YCGAAACCGAAMCY
RGKTTCGGTTTCGR		 SELEX
Jolma et al.(2013)
IRF5_1 		0.740 0.740
IRF5
M03333_2.00 		Homo sapiens
HACCGAAACYV
BRGTTTCGGTD		 SELEX
Jolma et al.(2013)
IRF5_2 		0.740 0.740
IRF5
M05535_2.00 		Homo sapiens
NCGAAACCGAWACH
DGTWTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_eDBD_HT-SELEX 		0.740 0.740
IRF5
M05537_2.00 		Homo sapiens
NCGAAACCGAAACY
RGTTTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_FL_HT-SELEX 		0.740 0.740
IRF5
M10884_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF5_Q3 		0.740 0.740
IRF5
M05536_2.00 		Homo sapiens
NYGAWACYGAWACH
DGTWTCRGTWTCRN		 SELEX
Yin et al.(2017)
IRF5_eDBD_Methyl-HT-SELEX 		0.740 0.740
IRF5
M05538_2.00 		Homo sapiens
NYGAAACCGAWACY
RGTWTCGGTTTCRN		 SELEX
Yin et al.(2017)
IRF5_FL_Methyl-HT-SELEX 		0.740 0.740
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGMOP00000007757 IRF 10 114

Links

Other IRF family TFs
Other Gadus morhua TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R001981 Aptenodytes forsteri Afo_R001981 I 0.810
Alligator_sinensis_CCG003696.1 Alligator sinensis Alligator_sinensis_CCG003696.1 I 0.817
Alligator_sinensis_CCG004564.1 Alligator sinensis Alligator_sinensis_CCG004564.1 I 0.790
Alligator_sinensis_CCG015719.1 Alligator sinensis Alligator_sinensis_CCG015719.1 I 0.817
Cmyd_10002838 Chelonia mydas Cmyd_10002838 I 0.781
Cmyd_10010684 Chelonia mydas Cmyd_10010684 I 0.798
IRF6 Anolis carolinensis ENSACAG00000005931 I 0.808
ENSAMEG00000005109 Ailuropoda melanoleuca ENSAMEG00000005109 I 0.731
ENSAPLG00000006203 Anas platyrhynchos ENSAPLG00000006203 I 0.760
ENSAPLG00000009319 Anas platyrhynchos ENSAPLG00000009319 I 0.810
IRF5 Bos taurus ENSBTAG00000004989 I 0.724
IRF5 Canis familiaris ENSCAFG00000001611 I 0.740
IRF5 Callithrix jacchus ENSCJAG00000018061 I 0.731
ENSCSAG00000009970 Chlorocebus sabaeus ENSCSAG00000009970 I 0.733
irf5 Danio rerio ENSDARG00000045681 I 0.848
IRF5 Dasypus novemcinctus ENSDNOG00000013370 I 0.721
Irf5 Dipodomys ordii ENSDORG00000010627 I 0.731
IRF5 Equus caballus ENSECAG00000009902 I 0.740
IRF5 Erinaceus europaeus ENSEEUG00000014653 I
IRF5 Echinops telfairi ENSETEG00000002100 I
ENSFALG00000000504 Ficedula albicollis ENSFALG00000000504 I
IRF5 Felis catus ENSFCAG00000000956 I 0.731
IRF5 Homo sapiens ENSG00000128604 D 0.756
irf5 Gasterosteus aculeatus ENSGACG00000000695 I 0.865
IRF6 Gallus gallus ENSGALG00000001405 D 0.808
IRF5 Gorilla gorilla ENSGGOG00000012013 I 0.740
ENSLACG00000005750 Latimeria chalumnae ENSLACG00000005750 I 0.781
ENSLACG00000018600 Latimeria chalumnae ENSLACG00000018600 I 0.817
IRF5 Loxodonta africana ENSLAFG00000021568 I 0.740
ENSLOCG00000015563 Lepisosteus oculatus ENSLOCG00000015563 I 0.846
ENSMEUG00000002435 Macropus eugenii ENSMEUG00000002435 I 0.760
ENSMEUG00000014941 Macropus eugenii ENSMEUG00000014941 I 0.798
IRF6 Meleagris gallopavo ENSMGAG00000004431 D 0.810
IRF5 Microcebus murinus ENSMICG00000000138 I 0.731
IRF5 Myotis lucifugus ENSMLUG00000001406 I 0.733
IRF5 Macaca mulatta ENSMMUG00000018478 I 0.733
IRF6 Monodelphis domestica ENSMODG00000002539 I 0.798
IRF5 Monodelphis domestica ENSMODG00000014710 I 0.743
ENSMPUG00000006034 Mustela putorius furo ENSMPUG00000006034 I 0.731
Irf5 Mus musculus ENSMUSG00000029771 D 0.740
ENSNLEG00000012454 Nomascus leucogenys ENSNLEG00000012454 I 0.740
IRF5 Ornithorhynchus anatinus ENSOANG00000011449 I 0.752
IRF6 Ornithorhynchus anatinus ENSOANG00000013718 I 0.798
ENSOARG00000003908 Ovis aries ENSOARG00000003908 I 0.733
IRF5 Oryctolagus cuniculus ENSOCUG00000010101 D 0.740
IRF5 Otolemur garnettii ENSOGAG00000009608 I
ENSONIG00000007600 Oreochromis niloticus ENSONIG00000007600 I 0.867
IRF5 Ochotona princeps ENSOPRG00000006148 I 0.731
ENSP00000349770 Macaca fascicularis ENSP00000349770 I 0.733
ENSP00000349770-D1 Bos grunniens ENSP00000349770-D1 I 0.733
ENSPANG00000018384 Papio anubis ENSPANG00000018384 I 0.733
ENSPFOG00000013528 Poecilia formosa ENSPFOG00000013528 I 0.857
ENSPPYG00000017989 Pongo abelii ENSPPYG00000017989 I 0.740
ENSPSIG00000003597 Pelodiscus sinensis ENSPSIG00000003597 I 0.800
IRF5 Pan troglodytes ENSPTRG00000019675 I 0.740
IRF5 Pteropus vampyrus ENSPVAG00000015756 I
Irf5 Rattus norvegicus ENSRNOG00000007437 I 0.740
ENSSHAG00000006683 Sarcophilus harrisii ENSSHAG00000006683 I 0.733
IRF6 Sus scrofa ENSSSCG00000015612 I 0.795
IRF5 Sus scrofa ENSSSCG00000016573 I 0.731
ENSSTOG00000004858 Ictidomys tridecemlineatus ENSSTOG00000004858 I 0.731
IRF6 Taeniopygia guttata ENSTGUG00000001485 I 0.810
irf5 Tetraodon nigroviridis ENSTNIG00000003346 I 0.838
irf5 Takifugu rubripes ENSTRUG00000000641 I 0.865
ENSXMAG00000013056 Xiphophorus maculatus ENSXMAG00000013056 I 0.857
Myotis_brandtii_IRF5_10012830 Myotis brandtii Myotis_brandtii_IRF5_10012830 I 0.733
Pvit_14327 Pogona vitticeps Pvit_14327 I 0.779
Pvit_15428 Pogona vitticeps Pvit_15428 I 0.798
irf6.2 Xenopus tropicalis XB-GENE-5910331 D 0.808
irf6.2.L Xenopus laevis XB-GENE-5910427 I 0.817
irf6.S Xenopus laevis XB-GENE-876421 I 0.808
irf5 Xenopus tropicalis XB-GENE-998624 I 0.750
irf5.L Xenopus laevis XB-GENE-998629 D 0.769