irf6 (Oryzias latipes)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSORLG00000000511 T244291_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IRF6
M02254_2.00
Meleagris gallopavo
NRNCGAWACY

RGTWTCGNYN
PBM
Weirauch et al.(2014)
pTH9210
0.867 0.867
IRF6
M02253_2.00
Gallus gallus
NNMCNAAWNN

NNWTTNGKNN
PBM
Weirauch et al.(2014)
pTH9178
0.857 0.857
Irf6
M00176_2.00
Mus musculus
NNNHGADASN

NSTHTCDNNN
PBM
Badis et al.(2009)
Irf6_3803
0.838 0.838
irf6.2
M02259_2.00
Xenopus tropicalis
NVNHGAWACH

DGTWTCDNBN
PBM
Weirauch et al.(2014)
pTH9302
0.838 0.838
IRF6
M05527_2.00
Homo sapiens
RGTWTCGNNNNNNYGAWACY

RGTWTCRNNNNNNCGAWACY
SELEX
Yin et al.(2017)
IRF6_eDBD_HT-SELEX
0.838 0.838
IRF6
M05529_2.00
Homo sapiens
ACCGAAACT

AGTTTCGGT
SELEX
Yin et al.(2017)
IRF6_FL_HT-SELEX
0.838 0.838
IRF6
M05528_2.00
Homo sapiens
RGTWTCGNHNNDNYGAWACY

RGTWTCRNHNNDNCGAWACY
SELEX
Yin et al.(2017)
IRF6_eDBD_Methyl-HT-SELEX
0.838 0.838
IRF6
M05530_2.00
Homo sapiens
ACCGAWACY

RGTWTCGGT
SELEX
Yin et al.(2017)
IRF6_FL_Methyl-HT-SELEX
0.838 0.838
irf5.L
M02260_2.00
Xenopus laevis
VNCGADACHN

NDGTHTCGNB
PBM
Weirauch et al.(2014)
pTH9367
0.762 0.762
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000000629 IRF 16 121

Links

Other IRF family TFs
Other Oryzias latipes TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACRE_066760 Acremonium chrysogenum ACRE_066760 N
Bcin13g03660 Botrytis cinerea Bcin13g03660 N
CFIO01_13490 Colletotrichum fioriniae CFIO01_13490 N
CMQ_7755 Grosmannia clavigera CMQ_7755 N
CSUB01_00741 Colletotrichum sublineola CSUB01_00741 N
EPUS_02971 Endocarpon pusillum EPUS_02971 N
estExt_fgenesh1_pg.C_40017 Cryphonectria parasitica estExt_fgenesh1_pg.C_40017 N
EV44_g2543 Erysiphe necator EV44_g2543 N
FGRRES_02718 Fusarium graminearum FGRRES_02718 N
FPSE_06488 Fusarium pseudograminearum FPSE_06488 N
GGTG_06715 Gaeumannomyces graminis GGTG_06715 N
GLRG_11249 Colletotrichum graminicola GLRG_11249 N
MBM_06419 Marssonina brunnea MBM_06419 N
MGG_01130 Magnaporthe oryzae MGG_01130 N
OIDMADRAFT_123417 Oidiodendron maius OIDMADRAFT_123417 N
S40285_03706 Stachybotrys chlorohalonata S40285_03706 N
S40288_09128 Stachybotrys chartarum S40288_09128 N
SBOR_3943 Sclerotinia borealis SBOR_3943 N
SS1G_02497 Sclerotinia sclerotiorum SS1G_02497 N
VDAG_09672 Verticillium dahliae VDAG_09672 N
VDBG_07807 Verticillium alfalfae VDBG_07807 N
VDBG_07807 Verticillium albo atrum VDBG_07807 N
VHEMI07500 Torrubiella hemipterigena VHEMI07500 N