ONIVA11G15310 (Oryza nivara)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 ONIVA11G15310 T245674_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD6
M06955_2.00 		Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN
NHDYCKCCGYHDHHNCCGSCG		 Dap-seq
OMalley et al.(2016)
AS2_col_a 		0.737 0.737
LOB
M06966_2.00 		Arabidopsis thaliana
NVCGGCGGHRRHDRMGGMGGH
DCCKCCKYHDYYDCCGCCGBN		 Dap-seq
OMalley et al.(2016)
LOB_col_a 		0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA11G15310.1 LOB 7 105

Links

Other LOB family TFs
Other Oryza nivara TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CSUB01_05669 Colletotrichum sublineola CSUB01_05669 N
gw1.00643.3.1 Aspergillus carbonarius gw1.00643.3.1 N
VDAG_07998 Verticillium dahliae VDAG_07998 N
VDBG_01263 Verticillium albo atrum VDBG_01263 N