VIT_07s0197g00030 (Vitis vinifera)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 VIT_07s0197g00030 T246246_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD6
M06955_2.00 		Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN
NHDYCKCCGYHDHHNCCGSCG		 Dap-seq
OMalley et al.(2016)
AS2_col_a 		0.737 0.737
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_07s0197g00030.t01 LOB 7 105

Links

Other LOB family TFs
Other Vitis vinifera TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
3770_YDR096W Saccharomyces mikatae 3770_YDR096W I
4088_Multiple Saccharomyces paradoxus 4088_Multiple I
4347_Multiple Saccharomyces bayanus 4347_Multiple I
6173_YER169W Saccharomyces mikatae 6173_YER169W I
6757_YER169W Saccharomyces paradoxus 6757_YER169W I
7085_YER169W Saccharomyces bayanus 7085_YER169W I
AACERI_AaceriAGR117C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGR117C I
AGOS_AGR117C Ashbya gossypii AGOS_AGR117C I
CAGL0L11880g Candida glabrata CAGL0L11880g I
Ecym_3520 Eremothecium cymbalariae Ecym_3520 I
KAFR_0A02380 Kazachstania africana KAFR_0A02380 I
KAFR_0B02550 Kazachstania africana KAFR_0B02550 I
KLLA0_C17710g Kluyveromyces lactis KLLA0_C17710g I
KLTH0G14454g Lachancea thermotolerans KLTH0G14454g I
KLTH0G14454g Kluyveromyces thermotolerans KLTH0G14454g I
KNAG_0G01870 Kazachstania naganishii KNAG_0G01870 I
KNAG_0H03010 Kazachstania naganishii KNAG_0H03010 I
Kpol_1032p52 Vanderwaltozyma polyspora Kpol_1032p52 I
Kwal_23453 Kluyveromyces waltii Kwal_23453 I
LALA0_S07e07030g Lachancea lanzarotensis LALA0_S07e07030g I
NCAS_0B04840 Naumovozyma castellii NCAS_0B04840 I
NDAI_0B02250 Naumovozyma dairenensis NDAI_0B02250 I
SAKL0H17842g Lachancea kluyveri SAKL0H17842g I
Scas_Contig681.19 Saccharomyces castellii Scas_Contig681.19 I
SKUD_141701 Saccharomyces kudriavzevii SKUD_141701 I
SU7_0636 Saccharomyces arboricola SU7_0636 I
TBLA_0E04220 Tetrapisispora blattae TBLA_0E04220 I
TBLA_0F03830 Tetrapisispora blattae TBLA_0F03830 I
TDEL_0A01300 Torulaspora delbrueckii TDEL_0A01300 I
TPHA_0A01940 Tetrapisispora phaffii TPHA_0A01940 I
GIS1 Saccharomyces cerevisiae YDR096W D
RPH1 Saccharomyces cerevisiae YER169W D
ZBAI_04846 Zygosaccharomyces bailii ZBAI_04846 I
ZBAI_06407 Zygosaccharomyces bailii ZBAI_06407 I
ZYRO0B11770g Zygosaccharomyces rouxii ZYRO0B11770g I