Cucsa.257700 (Cucumis sativus)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Cucsa.257700 T246521_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD18
M06962_2.00 		Arabidopsis thaliana
SCGGRRAWHVHGSMRNNDN
NHNNYKSCDBDWTYYCCGS		 Dap-seq
OMalley et al.(2016)
LBD18_col_a 		0.798 0.798
LBD18
M06963_2.00 		Arabidopsis thaliana
CDBDWTTTMHGSHRN
NYDSCDKAAAWHVHG		 Dap-seq
OMalley et al.(2016)
LBD18_colamp_a 		0.798 0.798
LBD30
M01066_2.00 		Arabidopsis thaliana
BVWWWHVNGG
CCNBDWWWBV		 PBM
Sullivan et al.(2014)
pTH7467 		0.758 0.758
LBD30
M01067_2.00 		Arabidopsis thaliana
VWWWNVNGGD
HCCNBNWWWB		 PBM
Sullivan et al.(2014)
pTH7616 		0.758 0.758
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.257700.1 LOB 24 123

Links

Other LOB family TFs
Other Cucumis sativus TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cflo_01074--XP_394229.2_APIME Camponotus floridanus Cflo_01074--XP_394229.2_APIME N 0.000
GB54865 Apis mellifera GB54865 N 0.000
Hsal_00608--XP_394229.2_APIME Harpegnathos saltator Hsal_00608--XP_394229.2_APIME N 0.000
LDEC000156 Leptinotarsa decemlineata LDEC000156 N 0.000
SINV12226 Solenopsis invicta SINV12226 N 0.000