CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.56.82.1
(
Physcomitrella patens
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
gw1.56.82.1
T246562_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.56.82.1
LOB
3
96
ACAACKYQRRKCATDCPLAPYFPPDQPKRFLNVHRLFGVSSILRILRQVDPEKREDTVKSIVYEADTREKDPVHGCLGVIRLLQNQVNKLKDEV
Links
Other
LOB
family TFs
Other
Physcomitrella patens
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_Genewise1.C_1840020
Physcomitrella patens
estExt_Genewise1.C_1840020
N
0.840
estExt_gwp_gw1.C_1340024
Physcomitrella patens
estExt_gwp_gw1.C_1340024
N
0.808
GSMUA_Achr5G15570_001
Musa acuminata
GSMUA_Achr5G15570_001
N
0.714
gw1.10.155.1
Physcomitrella patens
gw1.10.155.1
N
0.798
gw1.13.203.1
Physcomitrella patens
gw1.13.203.1
N
0.968
gw1.73.66.1
Physcomitrella patens
gw1.73.66.1
N
0.788
gw1.9.179.1
Physcomitrella patens
gw1.9.179.1
N
0.798
gw1.9.180.1
Physcomitrella patens
gw1.9.180.1
N
0.840