Ciclev10021399m.g (Citrus clementina)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Ciclev10021399m.g T246808_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10021399m LOB 10 109

Links

Other LOB family TFs
Other Citrus clementina TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29805.m001471 Ricinus communis 29805.m001471 I
AMTR_s00052p00202630 Amborella trichopoda AMTR_s00052p00202630 I
Aquca_027_00077 Aquilegia coerulea Aquca_027_00077 I
S1FA2 Arabidopsis thaliana AT2G37120 I
S1FA3 Arabidopsis thaliana AT3G09735 D
S1FA1 Arabidopsis thaliana AT3G53370 I
BGIOSGA015142 Oryza indica BGIOSGA015142 N
BGIOSGA015143 Oryza indica BGIOSGA015143 N
BGIOSGA015145 Oryza indica BGIOSGA015145 N
Bo6g067310 Brassica oleracea Bo6g067310 I
Bostr.11793s0058 Boechera stricta Bostr.11793s0058 I
Bostr.23794s0377 Boechera stricta Bostr.23794s0377 I
Bra003132 Brassica rapa Bra003132 I
Bra029784 Brassica rapa Bra029784 I
BRADI5G09140 Brachypodium distachyon BRADI5G09140 N
Cagra.0612s0062 Capsella grandiflora Cagra.0612s0062 I
Cagra.0666s0032 Capsella grandiflora Cagra.0666s0032 I
Cagra.2515s0064 Capsella grandiflora Cagra.2515s0064 I
Carubv10015035m.g Capsella rubella Carubv10015035m.g I
Carubv10018341m.g Capsella rubella Carubv10018341m.g I
Carubv10025429m.g Capsella rubella Carubv10025429m.g I
cassava45931.m1 Manihot esculenta cassava45931.m1 I
Ca_12027 Cicer arietinum Ca_12027 I
chr1.CM0033.550.nc Lotus japonicus chr1.CM0033.550.nc I
Ciclev10013218m.g Citrus clementina Ciclev10013218m.g I
Cla018106 Citrullus lanatus Cla018106 I
Cla018556 Citrullus lanatus Cla018556 I
Cucsa.124240 Cucumis sativus Cucsa.124240 I
Cucsa.307040 Cucumis sativus Cucsa.307040 I
Eucgr.A01168 Eucalyptus grandis Eucgr.A01168 I
evm.TU.supercontig_638.2 Carica papaya evm.TU.supercontig_638.2 I
fgenesh1_pm.C_scaffold_5001425 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001425 I
gene09647-v1.0-hybrid Fragaria vesca gene09647-v1.0-hybrid N
GLYMA03G33640 Glycine max GLYMA03G33640 I
GLYMA10G05790 Glycine max GLYMA10G05790 I
GLYMA13G20160 Glycine max GLYMA13G20160 I
GLYMA19G36350 Glycine max GLYMA19G36350 I
Gorai.002G249300 Gossypium raimondii Gorai.002G249300 I
Gorai.006G168100 Gossypium raimondii Gorai.006G168100 I
Gorai.009G419300 Gossypium raimondii Gorai.009G419300 I
GRMZM2G056929 Zea mays GRMZM2G056929 N
GRMZM2G147424 Zea mays GRMZM2G147424 N
GSMUA_Achr10G13120_001 Musa acuminata GSMUA_Achr10G13120_001 I
GSMUA_Achr3G17900_001 Musa acuminata GSMUA_Achr3G17900_001 N
GSMUA_Achr6G23400_001 Musa acuminata GSMUA_Achr6G23400_001 N
LPERR04G08400 Leersia perrieri LPERR04G08400 N
LPERR04G08410 Leersia perrieri LPERR04G08410 I
Lus10015073.g Linum usitatissimum Lus10015073.g I
Lus10023177.g Linum usitatissimum Lus10023177.g I
MDP0000276000 Malus domestica MDP0000276000 N
mgf000337m Mimulus guttatus mgf000337m I
MLOC_67411 Hordeum vulgare MLOC_67411 N
MTR_7g100905 Medicago truncatula MTR_7g100905 I
OB04G18770 Oryza brachyantha OB04G18770 I
OBART04G11650 Oryza barthii OBART04G11650 N
OBART04G11660 Oryza barthii OBART04G11660 N
OGLUM04G11330 Oryza glumaepatula OGLUM04G11330 N
OGLUM04G11340 Oryza glumaepatula OGLUM04G11340 N
OMERI04G10270 Oryza meridionalis OMERI04G10270 N
OMERI04G10280 Oryza meridionalis OMERI04G10280 N
ONIVA04G09610 Oryza nivara ONIVA04G09610 N
ONIVA04G09620 Oryza nivara ONIVA04G09620 N
OPUNC04G09650 Oryza punctata OPUNC04G09650 I
OPUNC04G09660 Oryza punctata OPUNC04G09660 N
orange1.1g044991m.g Citrus sinensis orange1.1g044991m.g I
ORGLA04G0086600 Oryza glaberrima ORGLA04G0086600 N
ORGLA04G0086800 Oryza glaberrima ORGLA04G0086800 N
ORUFI04G12840 Oryza rufipogon ORUFI04G12840 N
ORUFI04G12850 Oryza rufipogon ORUFI04G12850 N
S1FA2 Oryza sativa OS04G0408700 N
OS04G0408900 Oryza sativa OS04G0408900 N
Pavir.Ga01929 Panicum virgatum Pavir.Ga01929 N
Pavir.Gb01773 Panicum virgatum Pavir.Gb01773 N
PGSC0003DMG400001772 Solanum tuberosum PGSC0003DMG400001772 I
Pm002519 Prunus mume Pm002519 N
POPTR_0006s13230 Populus trichocarpa POPTR_0006s13230 I
POPTR_0016s08890 Populus trichocarpa POPTR_0016s08890 I
PRUPE_ppa014157mg Prunus persica PRUPE_ppa014157mg N
SapurV1A.0112s0080 Salix purpurea SapurV1A.0112s0080 I
SapurV1A.0209s0130 Salix purpurea SapurV1A.0209s0130 I
Sb06g015340 Sorghum bicolor Sb06g015340 N
scaffold_402348.1 Arabidopsis lyrata scaffold_402348.1 I
Si011030m.g Setaria italica Si011030m.g N
Solyc09g007500.2 Solanum lycopersicum Solyc09g007500.2 I
TCM_022113 Theobroma cacao TCM_022113 I
Thhalv10017496m.g Eutrema salsugineum Thhalv10017496m.g I
Thhalv10021874m.g Eutrema salsugineum Thhalv10021874m.g I
Traes_2AL_65586C538 Triticum aestivum Traes_2AL_65586C538 N
Traes_2BL_26A5F9082 Triticum aestivum Traes_2BL_26A5F9082 N
Traes_2DL_032C7FC8C Triticum aestivum Traes_2DL_032C7FC8C N
VIT_06s0004g03160 Vitis vinifera VIT_06s0004g03160 I
VIT_08s0040g02220 Vitis vinifera VIT_08s0040g02220 I