OLONG_017894 (Oryza longistaminata)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 OLONG_017894 T249553_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.913 0.791
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.913 0.791
AT1G76880
M06970_2.00 		Arabidopsis thaliana
RHRGTAAAAWNDDDWW
WWHHHNWTTTTACYDY		 Dap-seq
OMalley et al.(2016)
AT1G76880_col_a 		0.823 0.687
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_017894-R1 MADF 1 70
OLONG_017894-R1 MADF 265 334

Links

Other MADF family TFs
Other Oryza longistaminata TFs

194 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_08815 Capronia coronata A1O1_08815 N
A1O3_06358 Capronia epimyces A1O3_06358 N
A1O5_12074 Cladophialophora psammophila A1O5_12074 N
A1O7_09385 Cladophialophora yegresii A1O7_09385 N
A1O9_05599 Exophiala aquamarina A1O9_05599 N
BAUCODRAFT_151124 Baudoinia compniacensis BAUCODRAFT_151124 N
BDDG_01560 Blastomyces dermatitidis BDDG_01560 N
ACLA_057380 Aspergillus clavatus CADACLAG00005479 N
AFUA_8G04050 Aspergillus fumigatus CADAFUAG00003174 N
ATEG_00017 Aspergillus terreus CADATEAG00006845 N
NFIA_096760 Neosartorya fischeri CADNFIAG00008980 N
CIMG_04403 Coccidioides immitis CIMG_04403 N
COCC4DRAFT_196527 Bipolaris maydis COCC4DRAFT_196527 N
COCCADRAFT_86582 Bipolaris zeicola COCCADRAFT_86582 N
COCMIDRAFT_1020 Bipolaris oryzae COCMIDRAFT_1020 N
COCSADRAFT_236058 Bipolaris sorokiniana COCSADRAFT_236058 N
COCVIDRAFT_89258 Bipolaris victoriae COCVIDRAFT_89258 N
CPC735_073390 Coccidioides posadasii CPC735_073390 N
DOTSEDRAFT_73764 Dothistroma septosporum DOTSEDRAFT_73764 N
estExt_Genewise1.C_50962 Cochliobolus heterostrophus C5 estExt_Genewise1.C_50962 N
e_gw1.00168.159.1 Aspergillus carbonarius e_gw1.00168.159.1 N
G647_09336 Cladophialophora carrionii G647_09336 N
HCBG_07066 Histoplasma capsulatum HCBG_07066 N
HMPREF1120_09077 Exophiala dermatitidis HMPREF1120_09077 N
HMPREF1541_02517 Cyphellophora europaea HMPREF1541_02517 N
LEMA_P074270.1 Leptosphaeria maculans LEMA_P074270.1 N
MCYG_04601 Microsporum canis MCYG_04601 N
MCYG_04601 Arthroderma otae MCYG_04601 N
PABG_02006 Paracoccidioides brasiliensis PABG_02006 N
Pc22g10070 Penicillium chrysogenum Pc22g10070 N
PCH_Pc22g10070 Penicillium rubens PCH_Pc22g10070 N
PDE_00973 Penicillium oxalicum PDE_00973 N
PEX1_097650 Penicillium expansum PEX1_097650 N
PITC_007200 Penicillium italicum PITC_007200 N
PV04_10035 Capronia semiimmersa PV04_10035 N
PV06_06886 Exophiala oligosperma PV06_06886 N
PV07_08929 Cladophialophora immunda PV07_08929 N
PV08_07435 Exophiala spinifera PV08_07435 N
PV10_01710 Exophiala mesophila PV10_01710 N
PV11_05777 Exophiala sideris PV11_05777 N
PVAR5_2342 Byssochlamys spectabilis PVAR5_2342 N
SNOG_02548 Phaeosphaeria nodorum SNOG_02548 N
SNOG_02548 Stagonospora nodorum SNOG_02548 N
Z517_09513 Fonsecaea pedrosoi Z517_09513 N
Z518_07681 Rhinocladiella mackenziei Z518_07681 N
Z519_12336 Cladophialophora bantiana Z519_12336 N