cassava30771.valid.m1 (Manihot esculenta)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 cassava30771.valid.m1 T250472_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.957 0.851
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.957 0.851
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.957 0.851
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.953 0.838
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava30771.valid.m1 MADF 161 242

Links

Other MADF family TFs
Other Manihot esculenta TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_02058 Capronia epimyces A1O3_02058 N
A1O3_05986 Capronia epimyces A1O3_05986 N
A1O5_04090 Cladophialophora psammophila A1O5_04090 N
A1O9_05200 Exophiala aquamarina A1O9_05200 N
PV05_08733 Exophiala xenobiotica PV05_08733 N
Z518_08035 Rhinocladiella mackenziei Z518_08035 N
Z519_03363 Cladophialophora bantiana Z519_03363 N