Gorai.001G020300 (Gossypium raimondii)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Gorai.001G020300 T250699_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS02G0104500
M02271_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH8719 		0.857 0.691
OS02G0104500
M02272_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH9273 		0.857 0.691
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.001G020300.1 MADF 427 497

Links

Other MADF family TFs
Other Gossypium raimondii TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28976.m000155 Ricinus communis 28976.m000155 N
30076.m004659 Ricinus communis 30076.m004659 I
30131.m007078 Ricinus communis 30131.m007078 I
30138.m003866 Ricinus communis 30138.m003866 I
AMTR_s00014p00097990 Amborella trichopoda AMTR_s00014p00097990 N
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I
Aquca_022_00003 Aquilegia coerulea Aquca_022_00003 I
Aquca_024_00067 Aquilegia coerulea Aquca_024_00067 N
ATBZIP42 Arabidopsis thaliana AT3G30530 D
BZIP53 Arabidopsis thaliana AT3G62420 D
Bo2g012800 Brassica oleracea Bo2g012800 I
Bo6g079450 Brassica oleracea Bo6g079450 I
Bo8g097830 Brassica oleracea Bo8g097830 I
Bo9g163740 Brassica oleracea Bo9g163740 I
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I
Bra003500 Brassica rapa Bra003500 I
Bra007679 Brassica rapa Bra007679 I
Bra008670 Brassica rapa Bra008670 I
Bra023540 Brassica rapa Bra023540 I
Bra039631 Brassica rapa Bra039631 I
Cagra.0483s0006 Capsella grandiflora Cagra.0483s0006 I
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I
Carubv10002068m.g Capsella rubella Carubv10002068m.g I
Carubv10018852m.g Capsella rubella Carubv10018852m.g I
cassava18334.valid.m1 Manihot esculenta cassava18334.valid.m1 I
cassava23775.valid.m1 Manihot esculenta cassava23775.valid.m1 I
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I
cassava32522.m1 Manihot esculenta cassava32522.m1 I
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I
cassava36049.valid.m1 Manihot esculenta cassava36049.valid.m1 I
cassava41140.m1 Manihot esculenta cassava41140.m1 I
cassava46237.m1 Manihot esculenta cassava46237.m1 I
cassava9577.m1 Manihot esculenta cassava9577.m1 I
Ca_01004 Cicer arietinum Ca_01004 I
Ca_03512 Cicer arietinum Ca_03512 I
Ca_09362 Cicer arietinum Ca_09362 I
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I
Ciclev10002731m.g Citrus clementina Ciclev10002731m.g N
Ciclev10013334m.g Citrus clementina Ciclev10013334m.g I
Ciclev10022730m.g Citrus clementina Ciclev10022730m.g I
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I
Cla005975 Citrullus lanatus Cla005975 I
Cla008074 Citrullus lanatus Cla008074 I
Cla016748 Citrullus lanatus Cla016748 I
Cla016841 Citrullus lanatus Cla016841 I
Cla020641 Citrullus lanatus Cla020641 I
Cla022814 Citrullus lanatus Cla022814 N
Cucsa.109420 Cucumis sativus Cucsa.109420 I
Cucsa.174700 Cucumis sativus Cucsa.174700 I
Cucsa.238410 Cucumis sativus Cucsa.238410 I
Cucsa.248080 Cucumis sativus Cucsa.248080 N
Cucsa.284240 Cucumis sativus Cucsa.284240 I
Eucgr.F01867 Eucalyptus grandis Eucgr.F01867 N
Eucgr.G01645 Eucalyptus grandis Eucgr.G01645 N
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I
Eucgr.L01789 Eucalyptus grandis Eucgr.L01789 N
evm.TU.supercontig_129.74 Carica papaya evm.TU.supercontig_129.74 I
evm.TU.supercontig_18.43 Carica papaya evm.TU.supercontig_18.43 I
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I
ATBZIP53 Arabidopsis lyrata fgenesh2_kg.5__2740__AT3G62420.1 I
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I
GLYMA01G09510 Glycine max GLYMA01G09510 I
GLYMA01G40370 Glycine max GLYMA01G40370 I
GLYMA02G13960 Glycine max GLYMA02G13960 I
GLYMA03G37790 Glycine max GLYMA03G37790 I
GLYMA04G01210 Glycine max GLYMA04G01210 I
GLYMA06G01240 Glycine max GLYMA06G01240 I
GLYMA11G04920 Glycine max GLYMA11G04920 I
GLYMA11G12240 Glycine max GLYMA11G12240 I
GLYMA12G04440 Glycine max GLYMA12G04440 I
GLYMA17G17100 Glycine max GLYMA17G17100 I
GLYMA19G05050 Glycine max GLYMA19G05050 I
GLYMA19G40390 Glycine max GLYMA19G40390 I
Gorai.001G144200 Gossypium raimondii Gorai.001G144200 I
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I
Gorai.002G126500 Gossypium raimondii Gorai.002G126500 I
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I
Gorai.007G056900 Gossypium raimondii Gorai.007G056900 I
Gorai.007G122800 Gossypium raimondii Gorai.007G122800 I
Gorai.008G065300 Gossypium raimondii Gorai.008G065300 I
Gorai.008G085200 Gossypium raimondii Gorai.008G085200 I
Gorai.012G155000 Gossypium raimondii Gorai.012G155000 N
GRMZM2G073427 Zea mays GRMZM2G073427 I
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I
GSMUA_Achr11G20700_001 Musa acuminata GSMUA_Achr11G20700_001 I
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I
GSMUA_Achr1G25340_001 Musa acuminata GSMUA_Achr1G25340_001 I
GSMUA_Achr2G06540_001 Musa acuminata GSMUA_Achr2G06540_001 I
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I
GSMUA_Achr8G29960_001 Musa acuminata GSMUA_Achr8G29960_001 I
Lus10001347.g Linum usitatissimum Lus10001347.g N
Lus10010005.g Linum usitatissimum Lus10010005.g I
Lus10011722.g Linum usitatissimum Lus10011722.g I
Lus10013059.g Linum usitatissimum Lus10013059.g I
Lus10019273.g Linum usitatissimum Lus10019273.g N
Lus10024279.g Linum usitatissimum Lus10024279.g N
Lus10025024.g Linum usitatissimum Lus10025024.g I
Lus10029101.g Linum usitatissimum Lus10029101.g I
Lus10040428.g Linum usitatissimum Lus10040428.g I
MDP0000183562 Malus domestica MDP0000183562 I
MDP0000205823 Malus domestica MDP0000205823 I
MDP0000239026 Malus domestica MDP0000239026 I
MDP0000261154 Malus domestica MDP0000261154 N
MDP0000738631 Malus domestica MDP0000738631 I
MDP0000863909 Malus domestica MDP0000863909 I
MDP0000891108 Malus domestica MDP0000891108 I
mgf003466m Mimulus guttatus mgf003466m I
mgf004063m Mimulus guttatus mgf004063m N
mgf017392m Mimulus guttatus mgf017392m I
mgf018581m Mimulus guttatus mgf018581m I
mgf022473m Mimulus guttatus mgf022473m N
MTR_4g097440 Medicago truncatula MTR_4g097440 I
MTR_5g015090 Medicago truncatula MTR_5g015090 I
MTR_7g029400 Medicago truncatula MTR_7g029400 I
MTR_8g015250 Medicago truncatula MTR_8g015250 I
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I
orange1.1g032187m.g Citrus sinensis orange1.1g032187m.g I
orange1.1g041765m.g Citrus sinensis orange1.1g041765m.g N
orange1.1g042014m.g Citrus sinensis orange1.1g042014m.g I
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I
Pavir.Ca00746 Panicum virgatum Pavir.Ca00746 N
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I
PGSC0003DMG400003529 Solanum tuberosum PGSC0003DMG400003529 I
PGSC0003DMG400003701 Solanum tuberosum PGSC0003DMG400003701 I
PGSC0003DMG400005476 Solanum tuberosum PGSC0003DMG400005476 N
PGSC0003DMG400021431 Solanum tuberosum PGSC0003DMG400021431 I
PGSC0003DMG400022589 Solanum tuberosum PGSC0003DMG400022589 I
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I
PK03779.1 Cannabis sativa PK03779.1 I
PK07533.1 Cannabis sativa PK07533.1 I
Pm002353 Prunus mume Pm002353 I
Pm015434 Prunus mume Pm015434 I
POPTR_0002s19720 Populus trichocarpa POPTR_0002s19720 I
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I
POPTR_0014s11590 Populus trichocarpa POPTR_0014s11590 I
POPTR_0017s14490 Populus trichocarpa POPTR_0017s14490 I
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I
PRUPE_ppa013046mg Prunus persica PRUPE_ppa013046mg I
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I
SapurV1A.0158s0220 Salix purpurea SapurV1A.0158s0220 I
SapurV1A.0396s0080 Salix purpurea SapurV1A.0396s0080 I
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I
SapurV1A.3521s0020 Salix purpurea SapurV1A.3521s0020 I
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I
Solyc02g084860.1 Solanum lycopersicum Solyc02g084860.1 I
Solyc02g092090.1 Solanum lycopersicum Solyc02g092090.1 I
Solyc03g046440.1 Solanum lycopersicum Solyc03g046440.1 I
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I
TCM_000835 Theobroma cacao TCM_000835 I
TCM_004807 Theobroma cacao TCM_004807 I
Thhalv10006418m.g Eutrema salsugineum Thhalv10006418m.g I
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I