CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMAG_00537
(
Allomyces macrogynus
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
AMAG_00537
T252680_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMAG_00537T0
MADS box
27
74
PIRDERSRQVTFVKRKGGLLRKAYELSVLCGCEVGVVVFSKSGRLTTF
Links
Other
MADS box
family TFs
Other
Allomyces macrogynus
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA020074
Oryza indica
BGIOSGA020074
N
GRMZM2G037286
Zea mays
GRMZM2G037286
N
LPERR05G16610
Leersia perrieri
LPERR05G16610
N
OGLUM05G21920
Oryza glumaepatula
OGLUM05G21920
N
OMERI05G18690
Oryza meridionalis
OMERI05G18690
N
ONIVA05G21490
Oryza nivara
ONIVA05G21490
N
ORGLA05G0180800
Oryza glaberrima
ORGLA05G0180800
N
ORUFI05G21990
Oryza rufipogon
ORUFI05G21990
N
OS05G0485400
Oryza sativa
OS05G0485400
N
Pavir.J06020
Panicum virgatum
Pavir.J06020
N
Pavir.J13985
Panicum virgatum
Pavir.J13985
N
Sb09g023750
Sorghum bicolor
Sb09g023750
N
Si021890m.g
Setaria italica
Si021890m.g
N