ORUFI04G16410 (Oryza rufipogon)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 ORUFI04G16410 T255454_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9FVN1_MAIZE
M10982_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_03 		1.000 1.000
AGL16
M06987_2.00 		Arabidopsis thaliana
TWCCHAAWDDGGWAA
TTWCCHHWTTDGGWA		 Dap-seq
OMalley et al.(2016)
AGL16_col_a 		0.854 0.854
AGL16
M06988_2.00 		Arabidopsis thaliana
WDWNTTWCCHWAWWDGGAAAS
STTTCCHWWTWDGGWAANWHW		 Dap-seq
OMalley et al.(2016)
AGL16_colamp_a 		0.854 0.854
Q9ATE8_PETHY
M11011_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP21_01 		0.771 0.771
Q40591_TOBAC
M11002_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS1_03 		0.771 0.771
AGL1
M02694_2.00 		Arabidopsis thaliana
NDTDCCWWWWNDGGWAHN
NDTWCCHNWWWWGGHAHN		 SELEX
Mathelier et al.(2014)
MA0585.1 		0.750 0.750
AGL1
M10920_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL1_01 		0.750 0.750
AGL1
M10921_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL1_02 		0.750 0.750
Q9ATE7_PETHY
M11010_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP22_01 		0.750 0.750
M17_MAIZE
M10959_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$M17_01 		0.750 0.750
MADS2
M10966_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_02 		0.750 0.750
SHP2
M10914_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SHP2_01 		0.750 0.750
AG
M02695_2.00 		Arabidopsis thaliana
HTTWCCWWAWNDGGHADN
NHTDCCHNWTWWGGWAAD		 SELEX
Mathelier et al.(2014)
MA0005.2 		0.729 0.729
SOC1
M08425_2.00 		Arabidopsis thaliana
CCAAAAAWRGAAAND
HNTTTCYWTTTTTGG		 ChIP-chip
Mathelier et al.(2014)
MA0554.1 		0.729 0.729
AG
M10923_2.00 		Arabidopsis thaliana
HTTWCCWWAWNDGGHWDN
NHTDCCHNWTWWGGWAAD		 Transfac
Matys et al.(2006)
P$AG_01 		0.729 0.729
AG
M10924_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG_02 		0.729 0.729
AG
M10925_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG_03 		0.729 0.729
AG_TOBAC
M10995_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG1_02 		0.729 0.729
SOC1
M10915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL20_01 		0.729 0.729
AG
M10926_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AG_Q2 		0.729 0.729
Q9ATE9_PETHY
M11012_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP20_01 		0.729 0.729
Q9ATE3_PETHY
M11008_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP28_01 		0.729 0.729
Q08711_PETHY
M10999_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP6_01 		0.729 0.729
Q9AR49_MAIZE
M10980_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$M29_01 		0.729 0.729
O82698_MALDO
M11021_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS10_01 		0.729 0.729
O82699_MALDO
M11022_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS11_01 		0.729 0.729
MADS3_ORYSJ
M10963_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_01 		0.729 0.729
AG_PETHY
M10994_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_02 		0.729 0.729
AGL6
M06986_2.00 		Arabidopsis thaliana
TTWCCHAAAAWRGWAANWW
WWNTTWCYWTTTTDGGWAA		 Dap-seq
OMalley et al.(2016)
AGL6_col_a 		0.708 0.708
SVP
M06984_2.00 		Arabidopsis thaliana
DDCCVAAWANGGHAA
TTDCCNTWTTBGGHH		 Dap-seq
OMalley et al.(2016)
SVP_colamp_v3b 		0.708 0.708
SVP
M06985_2.00 		Arabidopsis thaliana
CCMAAWANGGWAANW
WNTTWCCNTWTTKGG		 Dap-seq
OMalley et al.(2016)
SVP_col_v3b 		0.708 0.708
SVP
M08424_2.00 		Arabidopsis thaliana
NWWHCCMAAAADGGAAARHH
DDYTTTCCHTTTTKGGDWWN		 ChIP-chip
Mathelier et al.(2014)
MA0555.1 		0.708 0.708
Q8VWZ3_MALDO
M11025_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS14_02 		0.708 0.708
Q8VWZ2_MALDO
M11024_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS15_02 		0.708 0.708
MAD17_ORYSJ
M10961_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS17_01 		0.708 0.708
MADS50
M10968_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS50_01 		0.708 0.708
MADS6
M10967_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS6_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI04G16410.1 MADS box 10 57
ORUFI04G16410.6 MADS box 10 57

Links

Other MADS box family TFs
Other Oryza rufipogon TFs

1004 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL007233 Aedes aegypti AAEL007233 I
AATE010730 Anopheles atroparvus AATE010730 I
ACEP22169 Atta cephalotes ACEP22169 I
ACUA004653 Anopheles culicifacies ACUA004653 I
ACYPI004681 Acyrthosiphon pisum ACYPI004681 I
AFAF005203 Anopheles farauti AFAF005203 I
Afo_R003517 Aptenodytes forsteri Afo_R003517 I
AFUN003340 Anopheles funestus AFUN003340 I
AGAP009286 Anopheles gambiae AGAP009286 I
AMEC007368 Anopheles melas AMEC007368 I
AMEM004474 Anopheles merus AMEM004474 I
ASIS016906 Anopheles sinensis ASIS016906 I
A_07830 Schistosoma haematobium A_07830 I
BGIBMGA004593 Bombyx mori BGIBMGA004593 I
BGLB000775 Biomphalaria glabrata BGLB000775 I
CapteG181040 Capitella teleta CapteG181040 I
Cflo_12390--XP_396560.3_APIME Camponotus floridanus Cflo_12390--XP_396560.3_APIME I
CGI_10014518 Crassostrea gigas CGI_10014518 I
Cmyd_10013310 Chelonia mydas Cmyd_10013310 I
CPIJ012530 Culex quinquefasciatus CPIJ012530 I
CpipJ_CPIJ012530 Culex pipiens CpipJ_CPIJ012530 I
D917_04367 Trichinella nativa D917_04367 I
D917_09304 Trichinella nativa D917_09304 I
DAPPUDRAFT_40822 Daphnia pulex DAPPUDRAFT_40822 I
EFV49707 Trichinella spiralis EFV49707 I
EFV60326 Trichinella spiralis EFV60326 I
FEZF1 Anolis carolinensis ENSACAG00000006695 I
ENSAMEG00000004386 Ailuropoda melanoleuca ENSAMEG00000004386 I
ENSAMEG00000015360 Ailuropoda melanoleuca ENSAMEG00000015360 I
ENSAPLG00000015055 Anas platyrhynchos ENSAPLG00000015055 I
FEZF1 Bos taurus ENSBTAG00000005103 I
FEZF2 Bos taurus ENSBTAG00000020302 I
ENSBTAP00000027056-D1 Bos grunniens ENSBTAP00000027056-D1 I
FEZF2 Canis familiaris ENSCAFG00000007121 I
FEZF1 Callithrix jacchus ENSCJAG00000017326 I
FEZF2 Callithrix jacchus ENSCJAG00000019670 I
FEZF2 Cavia porcellus ENSCPOG00000001697 I
FEZF1 Cavia porcellus ENSCPOG00000013096 I
ENSCSAG00000010570 Chlorocebus sabaeus ENSCSAG00000010570 I
ENSCSAG00000012034 Chlorocebus sabaeus ENSCSAG00000012034 I
fezf1 Danio rerio ENSDARG00000010270 I
fezf2 Danio rerio ENSDARG00000070677 I
FEZF1 Dasypus novemcinctus ENSDNOG00000002699 I
FEZF2 Dasypus novemcinctus ENSDNOG00000033694 I
FEZF2 Equus caballus ENSECAG00000021037 I
FEZF1 Equus caballus ENSECAG00000022989 I
ENSFALG00000009923 Ficedula albicollis ENSFALG00000009923 I
ENSFALG00000013223 Ficedula albicollis ENSFALG00000013223 I
FEZF2 Felis catus ENSFCAG00000012726 I
FEZF1 Homo sapiens ENSG00000128610 D
FEZF2 Homo sapiens ENSG00000153266 I
fezf1 Gasterosteus aculeatus ENSGACG00000008652 I
fezf2 Gasterosteus aculeatus ENSGACG00000011629 I
FEZF2 Gallus gallus ENSGALG00000007184 I
FEZF1 Gallus gallus ENSGALG00000008941 I
FEZF2 Gorilla gorilla ENSGGOG00000026200 I
ENSGMOG00000008799 Gadus morhua ENSGMOG00000008799 I
ENSGMOG00000010906 Gadus morhua ENSGMOG00000010906 I
ENSLACG00000002734 Latimeria chalumnae ENSLACG00000002734 I
ENSLACG00000013316 Latimeria chalumnae ENSLACG00000013316 I
FEZF1 Loxodonta africana ENSLAFG00000013550 I
FEZF2 Loxodonta africana ENSLAFG00000022425 I
ENSLOCG00000010412 Lepisosteus oculatus ENSLOCG00000010412 I
ENSLOCG00000015885 Lepisosteus oculatus ENSLOCG00000015885 I
ENSMEUG00000011663 Macropus eugenii ENSMEUG00000011663 I
FEZF2 Myotis lucifugus ENSMLUG00000007639 I
FEZF2 Macaca mulatta ENSMMUG00000021592 I
FEZF2 Monodelphis domestica ENSMODG00000002738 I
FEZF1 Monodelphis domestica ENSMODG00000015458 I
ENSMPUG00000006851 Mustela putorius furo ENSMPUG00000006851 I
ENSMPUG00000016916 Mustela putorius furo ENSMPUG00000016916 I
Fezf2 Mus musculus ENSMUSG00000021743 I
Fezf1 Mus musculus ENSMUSG00000029697 I
ENSNLEG00000011662 Nomascus leucogenys ENSNLEG00000011662 I
ENSOARG00000011770 Ovis aries ENSOARG00000011770 I
FEZF2 Oryctolagus cuniculus ENSOCUG00000002823 I
FEZF1 Oryctolagus cuniculus ENSOCUG00000021285 I
FEZF1 Otolemur garnettii ENSOGAG00000002663 I
FEZF2 Otolemur garnettii ENSOGAG00000008112 I
ENSONIG00000003101 Oreochromis niloticus ENSONIG00000003101 I
ENSONIG00000012688 Oreochromis niloticus ENSONIG00000012688 I
fezf2 Oryzias latipes ENSORLG00000010156 I
fezf1 Oryzias latipes ENSORLG00000019987 I
ENSP00000411145 Macaca fascicularis ENSP00000411145 I
ENSP00000411145-D1 Bos grunniens ENSP00000411145-D1 I
ENSP00000418804 Macaca fascicularis ENSP00000418804 I
ENSPANG00000013797 Papio anubis ENSPANG00000013797 I
ENSPANG00000015063 Papio anubis ENSPANG00000015063 I
FEZF2 Procavia capensis ENSPCAG00000006260 I
ENSPFOG00000017410 Poecilia formosa ENSPFOG00000017410 I
ENSPPYG00000013750 Pongo abelii ENSPPYG00000013750 I
ENSPSIG00000009843 Pelodiscus sinensis ENSPSIG00000009843 I
FEZF2 Pan troglodytes ENSPTRG00000015071 I
FEZF2 Pteropus vampyrus ENSPVAG00000003007 I
Fezf1 Rattus norvegicus ENSRNOG00000007608 I
Fezf2 Rattus norvegicus ENSRNOG00000009206 I
FEZF2 Sorex araneus ENSSARG00000009934 I
FEZF2 Sus scrofa ENSSSCG00000011487 I
ENSSSCG00000016612 Sus scrofa ENSSSCG00000016612 I
ENSSTOG00000022201 Ictidomys tridecemlineatus ENSSTOG00000022201 I
ENSSTOG00000023296 Ictidomys tridecemlineatus ENSSTOG00000023296 I
FEZF1 Taeniopygia guttata ENSTGUG00000004488 I
fezf1 Tetraodon nigroviridis ENSTNIG00000010414 I
fezf2 Takifugu rubripes ENSTRUG00000000387 I
fezf1 Takifugu rubripes ENSTRUG00000016410 I
FEZF2 Tursiops truncatus ENSTTRG00000002587 I
ENSXMAG00000002453 Xiphophorus maculatus ENSXMAG00000002453 I
e_gw.37.272.1 Branchiostoma floridae e_gw.37.272.1 I
erm Drosophila melanogaster FBgn0031375 D
GA16381 Drosophila pseudoobscura FBgn0076396 I
GF19706 Drosophila ananassae FBgn0096713 I
GG24566 Drosophila erecta FBgn0116698 I
GH10862 Drosophila grimshawi FBgn0118343 I
GH25019 Drosophila grimshawi FBgn0132474 I
GI13715 Drosophila mojavensis FBgn0136470 I
GL18461 Drosophila persimilis FBgn0156062 I
GM16579 Drosophila sechellia FBgn0171492 I
GD22883 Drosophila simulans FBgn0194277 I
GJ19651 Drosophila virilis FBgn0206793 I
GK24816 Drosophila willistoni FBgn0226775 I
GE15291 Drosophila yakuba FBgn0232877 I
GB40147 Apis mellifera GB40147 I
HelroG145609 Helobdella robusta HelroG145609 I
HelroG63207 Helobdella robusta HelroG63207 I
HMEL004320 Heliconius melpomene HMEL004320 I
ISCW016275 Ixodes scapularis ISCW016275 I
L798_10183 Zootermopsis nevadensis L798_10183 I
LCUP016153 Lucilia cuprina LCUP016153 I
LDEC014963 Leptinotarsa decemlineata LDEC014963 I
LotgiG68213 Lottia gigantea LotgiG68213 I
MCINX000801 Melitaea cinxia MCINX000801 I
MDOA009701 Musca domestica MDOA009701 I
Myotis_brandtii_FEZF2_10014238 Myotis brandtii Myotis_brandtii_FEZF2_10014238 I
nRc.2.0.1.g12535 Romanomermis culicivorax nRc.2.0.1.g12535 I
NV15785 Nasonia vitripennis NV15785 I
Ocbimv22019950m.g Octopus bimaculoides Ocbimv22019950m.g I
PHUM527180 Pediculus humanus PHUM527180 I
PPAI010881 Phlebotomus papatasi PPAI010881 I
Sakowv30000725m.g Saccoglossus kowalevskii Sakowv30000725m.g I
SINV23141 Solenopsis invicta SINV23141 I
SMAR013549 Strigamia maritima SMAR013549 I
Smp_144540 Schistosoma mansoni Smp_144540 I
SMU15029105 Schmidtea mediterranea SMU15029105 I
SPER_0003711101 Spirometra erinaceieuropaei SPER_0003711101 I
SPU_019089 Strongylocentrotus purpuratus SPU_019089 I
SPU_027491 Strongylocentrotus purpuratus SPU_027491 I
TC004673 Tribolium castaneum TC004673 I
TMUE_s0065001300 Trichuris muris TMUE_s0065001300 I
TRE_0000291701 Trichobilharzia regenti TRE_0000291701 I
fezf2 Xenopus tropicalis XB-GENE-1006432 I
fezf2.L Xenopus laevis XB-GENE-1006438 I
fezf1 Xenopus tropicalis XB-GENE-985988 I
fezf1.S Xenopus laevis XB-GENE-985994 I
YQE_09264 Dendroctonus ponderosae YQE_09264 I