CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400039674
(
Solanum tuberosum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PGSC0003DMG400039674
T255696_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400090103
MADS box
16
63
KIESKKALFTSFSKRLGGLFKTTSELVTEFDVDIGIIVFSPTGKPHSF
Links
Other
MADS box
family TFs
Other
Solanum tuberosum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400042890
Solanum tuberosum
PGSC0003DMG400042890
N
0.875
PGSC0003DMG400044761
Solanum tuberosum
PGSC0003DMG400044761
N
0.729
Solyc04g056550.1
Solanum lycopersicum
Solyc04g056550.1
N
0.708
Solyc10g050900.1
Solanum lycopersicum
Solyc10g050900.1
N
0.729
Solyc10g050950.1
Solanum lycopersicum
Solyc10g050950.1
N
0.750