Solyc08g067230.2 (Solanum lycopersicum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Solyc08g067230.2 T256360_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FBP1_PETHY
M10996_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP1_01 		0.958 0.958
MADS2_PETHY
M10998_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_01 		0.854 0.854
Q9AVU7_MALDO
M11027_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PI_01 		0.812 0.812
Q9ATE3_PETHY
M11008_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP28_01 		0.729 0.729
MADS18
M10973_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS18_01 		0.729 0.729
Q84LI3_WHEAT
M10979_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAVRT1_01 		0.729 0.729
O82128_WHEAT
M10965_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WAP1_01 		0.729 0.729
AGL6
M06986_2.00 		Arabidopsis thaliana
TTWCCHAAAAWRGWAANWW
WWNTTWCYWTTTTDGGWAA		 Dap-seq
OMalley et al.(2016)
AGL6_col_a 		0.708 0.708
SOC1
M08425_2.00 		Arabidopsis thaliana
CCAAAAAWRGAAAND
HNTTTCYWTTTTTGG		 ChIP-chip
Mathelier et al.(2014)
MA0554.1 		0.708 0.708
SOC1
M10915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL20_01 		0.708 0.708
MLOC_61901
M10964_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BM8_01 		0.708 0.708
O82699_MALDO
M11022_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS11_01 		0.708 0.708
MAD14_ORYSJ
M10960_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS14_01 		0.708 0.708
MAD17_ORYSJ
M10961_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS17_01 		0.708 0.708
MADS2
M10966_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_02 		0.708 0.708
Q9FR84_MAIZE
M10981_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_03 		0.708 0.708
MADS6
M10967_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS6_01 		0.708 0.708
Q41829_MAIZE
M10977_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ZAP1_02 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc08g067230.2.1 MADS box 10 57

Links

Other MADS box family TFs
Other Solanum lycopersicum TFs

277 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_02644 Capronia coronata A1O1_02644 I
A1O3_05207 Capronia epimyces A1O3_05207 I
A1O5_01739 Cladophialophora psammophila A1O5_01739 I
A1O7_08560 Cladophialophora yegresii A1O7_08560 I
A1O9_08184 Exophiala aquamarina A1O9_08184 I
AB00299.1 Alternaria brassicicola AB00299.1 I
ACRE_049560 Acremonium chrysogenum ACRE_049560 I
ARB_03230 Arthroderma benhamiae ARB_03230 I
AUEXF2481DRAFT_29116 Aureobasidium subglaciale AUEXF2481DRAFT_29116 I
BAUCODRAFT_66299 Baudoinia compniacensis BAUCODRAFT_66299 I
BBA_00830 Beauveria bassiana BBA_00830 I
Bcin08g06020 Botrytis cinerea Bcin08g06020 I
BDDG_04303 Blastomyces dermatitidis BDDG_04303 I
BGHDH14_bgh04283 Blumeria graminis BGHDH14_bgh04283 I
ACLA_075120 Aspergillus clavatus CADACLAG00006456 I
CADAFLAG00003349 Aspergillus flavus CADAFLAG00003349 I
AFUA_2G16160 Aspergillus fumigatus CADAFUAG00004679 I
CADANGAG00012333 Aspergillus niger CADANGAG00012333 I
ANIA_02136 Aspergillus nidulans CADANIAG00008814 I
CADAORAG00005796 Aspergillus oryzae CADAORAG00005796 I
ATEG_02328 Aspergillus terreus CADATEAG00000227 I
NFIA_091420 Neosartorya fischeri CADNFIAG00007675 I
CCM_05608 Cordyceps militaris CCM_05608 I
CFIO01_07548 Colletotrichum fioriniae CFIO01_07548 I
CGGC5_11552 Colletotrichum gloeosporioides CGGC5_11552 I
CH063_02161 Colletotrichum higginsianum CH063_02161 I
CIMG_09527 Coccidioides immitis CIMG_09527 N
Cob_12019 Colletotrichum orbiculare Cob_12019 I
COCC4DRAFT_56976 Bipolaris maydis COCC4DRAFT_56976 I
COCCADRAFT_27331 Bipolaris zeicola COCCADRAFT_27331 I
COCMIDRAFT_2306 Bipolaris oryzae COCMIDRAFT_2306 I
COCSADRAFT_174784 Bipolaris sorokiniana COCSADRAFT_174784 I
COCVIDRAFT_17513 Bipolaris victoriae COCVIDRAFT_17513 I
CPC735_018780 Coccidioides posadasii CPC735_018780 N
CPUR_06724 Claviceps purpurea CPUR_06724 I
CSUB01_02966 Colletotrichum sublineola CSUB01_02966 I
CTHT_0052970 Chaetomium thermophilum CTHT_0052970 I
DOTSEDRAFT_122593 Dothistroma septosporum DOTSEDRAFT_122593 I
EPUS_00470 Endocarpon pusillum EPUS_00470 I
estExt_fgenesh1_pg.C_10631 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_10631 I
estExt_fgenesh1_pm.C_sca_6_chr9_2_00089 Nectria haematococca estExt_fgenesh1_pm.C_sca_6_chr9_2_00089 I
estExt_Genewise1Plus.C_11214 Neurospora discreta estExt_Genewise1Plus.C_11214 I
EURHEDRAFT_376515 Aspergillus ruber EURHEDRAFT_376515 I
EV44_g5594 Erysiphe necator EV44_g5594 I
F503_00618 Ophiostoma piceae uamh F503_00618 I
FFUJ_02710 Fusarium fujikuroi FFUJ_02710 I
fgenesh1_kg.C_chr_2000382 Mycosphaerella graminicola fgenesh1_kg.C_chr_2000382 I
fgenesh1_pm.00815_#_36 Aspergillus carbonarius fgenesh1_pm.00815_#_36 I
FGRRES_07133 Fusarium graminearum FGRRES_07133 I
FPSE_04097 Fusarium pseudograminearum FPSE_04097 I
FVEG_08032 Fusarium verticillioides FVEG_08032 I
G647_07533 Cladophialophora carrionii G647_07533 I
GGTG_00248 Gaeumannomyces graminis GGTG_00248 I
GLRG_03269 Colletotrichum graminicola GLRG_03269 I
GMDG_05406 Pseudogymnoascus destructans GMDG_05406 I
GSTUM_00005719001 Tuber melanosporum GSTUM_00005719001 I
H072_1268 Dactylellina haptotyla H072_1268 I
H101_06083 Trichophyton interdigitale H101_06083 I
H102_03959 Trichophyton rubrum H102_03959 I
H105_03987 Trichophyton soudanense H105_03987 I
HCBG_07525 Histoplasma capsulatum HCBG_07525 I
HMPREF1541_03796 Cyphellophora europaea HMPREF1541_03796 I
LEMA_P079440.1 Leptosphaeria maculans LEMA_P079440.1 I
M437DRAFT_36734 Aureobasidium melanogenum M437DRAFT_36734 I
M438DRAFT_279552 Aureobasidium pullulans M438DRAFT_279552 I
MAC_00493 Metarhizium acridum MAC_00493 I
MAJ_02006 Metarhizium majus MAJ_02006 I
MAM_07504 Metarhizium album MAM_07504 I
MANI_005306 Metarhizium anisopliae MANI_005306 I
MAPG_11053 Magnaporthe poae MAPG_11053 I
MBM_03820 Marssonina brunnea MBM_03820 I
MBR_03811 Metarhizium brunneum MBR_03811 I
MCYG_03841 Microsporum canis MCYG_03841 I
MCYG_03841 Arthroderma otae MCYG_03841 I
MGG_07063 Magnaporthe oryzae MGG_07063 I
MGU_05868 Metarhizium guizhouense MGU_05868 I
MGYG_07809 Microsporum gypseum MGYG_07809 I
MPH_02318 Macrophomina phaseolina MPH_02318 I
MYCFIDRAFT_131841 Pseudocercospora fijiensis MYCFIDRAFT_131841 I
Mycgr3G79543 Zymoseptoria tritici Mycgr3G79543 I
NCU01243 Neurospora crassa NCU01243 D
NechaG105273 Fusarium solani NechaG105273 I
NEUTE1DRAFT_57664 Neurospora tetrasperma NEUTE1DRAFT_57664 I
OIDMADRAFT_115449 Oidiodendron maius OIDMADRAFT_115449 I
PAAG_06649 Paracoccidioides sp lutzii PAAG_06649 I
PABG_02664 Paracoccidioides brasiliensis PABG_02664 I
Pc21g01880 Penicillium chrysogenum Pc21g01880 I
PCH_Pc21g01880 Penicillium rubens PCH_Pc21g01880 I
PDE_07750 Penicillium oxalicum PDE_07750 I
PDIP_80460 Penicillium digitatum PDIP_80460 I
PEX1_034880 Penicillium expansum PEX1_034880 I
PFICI_07655 Pestalotiopsis fici PFICI_07655 I
PITC_083010 Penicillium italicum PITC_083010 I
PMAA_038040 Talaromyces marneffei PMAA_038040 I
PMAA_038040 Penicillium marneffei PMAA_038040 I
PODANS_2_3270 Podospora anserina PODANS_2_3270 I
PTRG_09915 Pyrenophora triticirepentis PTRG_09915 I
PTT_08856 Pyrenophora teres PTT_08856 I
PV04_09113 Capronia semiimmersa PV04_09113 I
PV05_00645 Exophiala xenobiotica PV05_00645 I
PV06_07336 Exophiala oligosperma PV06_07336 I
PV07_00703 Cladophialophora immunda PV07_00703 I
PV08_01635 Exophiala spinifera PV08_01635 I
PV10_04586 Exophiala mesophila PV10_04586 I
PV11_02999 Exophiala sideris PV11_02999 I
PVAR5_0278 Byssochlamys spectabilis PVAR5_0278 I
S40285_04268 Stachybotrys chlorohalonata S40285_04268 I
S40288_01230 Stachybotrys chartarum S40288_01230 I
SAPIO_CDS10407 Scedosporium apiospermum SAPIO_CDS10407 I
SBOR_5353 Sclerotinia borealis SBOR_5353 I
SEPMUDRAFT_60609 Sphaerulina musiva SEPMUDRAFT_60609 I
SETTUDRAFT_102674 Setosphaeria turcica SETTUDRAFT_102674 I
SMAC_03943 Sordaria macrospora SMAC_03943 I
SNOG_10444 Stagonospora nodorum SNOG_10444 I
SNOG_10444 Phaeosphaeria nodorum SNOG_10444 I
TEQG_03253 Trichophyton equinum TEQG_03253 I
TESG_04315 Trichophyton tonsurans TESG_04315 I
TRIATDRAFT_233014 Trichoderma atroviride TRIATDRAFT_233014 I
TRIREDRAFT_23294 Trichoderma reesei TRIREDRAFT_23294 I
TRIVIDRAFT_63141 Trichoderma virens TRIVIDRAFT_63141 I
TRV_02459 Trichophyton verrucosum TRV_02459 I
TSTA_053980 Talaromyces stipitatus TSTA_053980 I
U727_00430142291 Penicillium solitum U727_00430142291 I
UCREL1_4926 Eutypa lata UCREL1_4926 I
UCRNP2_4556 Neofusicoccum parvum UCRNP2_4556 I
UCRPA7_1548 Togninia minima UCRPA7_1548 I
UREG_04794 Uncinocarpus reesii UREG_04794 N
UV8b_2437 Ustilaginoidea virens UV8b_2437 I
V499_03435 Pseudogymnoascus pannorum V499_03435 I
VDAG_08332 Verticillium dahliae VDAG_08332 I
VDBG_00044 Verticillium albo atrum VDBG_00044 I
VDBG_00044 Verticillium alfalfae VDBG_00044 I
VHEMI01335 Torrubiella hemipterigena VHEMI01335 I
W97_03344 Coniosporium apollinis W97_03344 I
X797_006177 Metarhizium robertsii X797_006177 I
Z517_05341 Fonsecaea pedrosoi Z517_05341 I
Z518_05333 Rhinocladiella mackenziei Z518_05333 I
Z519_01699 Cladophialophora bantiana Z519_01699 I