CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10011787.g
(
Linum usitatissimum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Lus10011787.g
T258550_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10011787
MADS box
10
57
MLNDKSCRQVTFSKRRTGLFKKAHELATLCAIQIAIMVFSPGGKPFCF
Links
Other
MADS box
family TFs
Other
Linum usitatissimum
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT1G17310
Arabidopsis thaliana
AT1G17310
N
AT1G72350
Arabidopsis thaliana
AT1G72350
N
Bo6g091550
Brassica oleracea
Bo6g091550
N
Bo6g115840
Brassica oleracea
Bo6g115840
N
Bo8g104960
Brassica oleracea
Bo8g104960
N
Bostr.10273s0116
Boechera stricta
Bostr.10273s0116
N
Bostr.7128s0342
Boechera stricta
Bostr.7128s0342
N
Bra003884
Brassica rapa
Bra003884
N
Bra026674
Brassica rapa
Bra026674
N
Cagra.0824s0100
Capsella grandiflora
Cagra.0824s0100
N
Cagra.1013s0063
Capsella grandiflora
Cagra.1013s0063
N
Carubv10021825m.g
Capsella rubella
Carubv10021825m.g
N
fgenesh2_kg.1__1889__AT1G17310.1
Arabidopsis lyrata
fgenesh2_kg.1__1889__AT1G17310.1
N
scaffold_202161.1
Arabidopsis lyrata
scaffold_202161.1
N
Thhalv10009669m.g
Eutrema salsugineum
Thhalv10009669m.g
N
Thhalv10019133m.g
Eutrema salsugineum
Thhalv10019133m.g
N