CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EFA79888.1
(
Polysphondylium pallidum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
EFA79888.1
T259216_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFA79888.1
MADS box
10
61
KITDERNRQVTFTKRKNGLIKKAMELAVLCDSSVTLVIVNNSPNAKEKYFQY
Links
Other
MADS box
family TFs
Other
Polysphondylium pallidum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
augustus_masked-nMf.1.1.scaf00263-processed-gene-0.1
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf00263-processed-gene-0.1
N
GPLIN_000229700
Globodera pallida
GPLIN_000229700
N
GPLIN_000229800
Globodera pallida
GPLIN_000229800
N
L596_g20787
Steinernema carpocapsae
L596_g20787
N
L892_g24390
Steinernema scapterisci
L892_g24390
N
L893_g20254
Steinernema glaseri
L893_g20254
N
L898_g31117
Steinernema monticolum
L898_g31117
N
Minc04783
Meloidogyne incognita
Minc04783
N