LjSGA_107301.1 (Lotus japonicus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 LjSGA_107301.1 T259402_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.733 0.733
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_107301.1 MADS box 57 102

Links

Other MADS box family TFs
Other Lotus japonicus TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL006160 Aedes aegypti AAEL006160 I
AALB007752 Anopheles albimanus AALB007752 I
Aan_R002212 Calypte anna Aan_R002212 I
Aan_R005895 Calypte anna Aan_R005895 I
Aan_R007315 Calypte anna Aan_R007315 I
AATE002063 Anopheles atroparvus AATE002063 I
ACEP16400 Atta cephalotes ACEP16400 I
Afo_R004888 Aptenodytes forsteri Afo_R004888 I
Afo_R008955 Aptenodytes forsteri Afo_R008955 I
Afo_R012718 Aptenodytes forsteri Afo_R012718 I
Alligator_sinensis_CCG001676.1 Alligator sinensis Alligator_sinensis_CCG001676.1 I
Alligator_sinensis_CCG010991.1 Alligator sinensis Alligator_sinensis_CCG010991.1 I
ASTEI07771 Anopheles stephensi ASTEI07771 I
Brh_R000794 Buceros rhinoceros Brh_R000794 I
Brh_R001637 Buceros rhinoceros Brh_R001637 I
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I
Cflo_03911--XP_394014.2_APIME Camponotus floridanus Cflo_03911--XP_394014.2_APIME I
Cmyd_10020455 Chelonia mydas Cmyd_10020455 I
Cmyd_10020845 Chelonia mydas Cmyd_10020845 I
Cmyd_10021516 Chelonia mydas Cmyd_10021516 I
RUNX2 Anolis carolinensis ENSACAG00000013003 I
RUNX3 Anolis carolinensis ENSACAG00000017855 I
ENSAMEG00000005325 Ailuropoda melanoleuca ENSAMEG00000005325 I
ENSAMEG00000009223 Ailuropoda melanoleuca ENSAMEG00000009223 I
ENSAMEG00000010102 Ailuropoda melanoleuca ENSAMEG00000010102 I
ENSAMXG00000000881 Astyanax mexicanus ENSAMXG00000000881 I
ENSAMXG00000004048 Astyanax mexicanus ENSAMXG00000004048 I
ENSAMXG00000012244 Astyanax mexicanus ENSAMXG00000012244 I
ENSAMXG00000017349 Astyanax mexicanus ENSAMXG00000017349 I
ENSAPLG00000007026 Anas platyrhynchos ENSAPLG00000007026 I
ENSAPLG00000011653 Anas platyrhynchos ENSAPLG00000011653 I
ENSAPLG00000016439 Anas platyrhynchos ENSAPLG00000016439 I
RUNX2 Bos taurus ENSBTAG00000004104 I
RUNX1 Bos taurus ENSBTAG00000004742 I
RUNX3 Bos taurus ENSBTAG00000019800 I
ENSBTAP00000006227-D1 Bos grunniens ENSBTAP00000006227-D1 I
RUNX1 Canis familiaris ENSCAFG00000009596 I
RUNX3 Canis familiaris ENSCAFG00000012903 I
ENSCING00000002253 Ciona intestinalis ENSCING00000002253 I
RUNX1 Callithrix jacchus ENSCJAG00000002816 I
RUNX3 Callithrix jacchus ENSCJAG00000020815 I
ENSCPOG00000000551 Cavia porcellus ENSCPOG00000000551 I
ENSCPOG00000002684 Cavia porcellus ENSCPOG00000002684 I
RUNX2 Cavia porcellus ENSCPOG00000005277 I
ENSCSAG00000000947 Chlorocebus sabaeus ENSCSAG00000000947 I
ENSCSAG00000008703 Chlorocebus sabaeus ENSCSAG00000008703 I
ENSCSAG00000012528 Chlorocebus sabaeus ENSCSAG00000012528 I
runx2a Danio rerio ENSDARG00000040261 I
runx3 Danio rerio ENSDARG00000052826 I
runx2b Danio rerio ENSDARG00000059233 I
CABZ01102124.1 Danio rerio ENSDARG00000103592 I
RUNX1 Dasypus novemcinctus ENSDNOG00000015041 I
RUNX2 Dasypus novemcinctus ENSDNOG00000034361 I
RUNX3 Dasypus novemcinctus ENSDNOG00000043493 I
Runx1 Dipodomys ordii ENSDORG00000004347 I
RUNX1 Equus caballus ENSECAG00000003462 I
RUNX2 Equus caballus ENSECAG00000020875 I
RUNX2 Erinaceus europaeus ENSEEUG00000009243 I
ENSFALG00000000025 Ficedula albicollis ENSFALG00000000025 I
ENSFALG00000000470 Ficedula albicollis ENSFALG00000000470 I
ENSFALG00000001493 Ficedula albicollis ENSFALG00000001493 I
RUNX3 Felis catus ENSFCAG00000000680 I
RUNX2 Felis catus ENSFCAG00000022480 I
ENSFCAG00000029032 Felis catus ENSFCAG00000029032 I
RUNX3 Homo sapiens ENSG00000020633 D
RUNX2 Homo sapiens ENSG00000124813 D
RUNX1 Homo sapiens ENSG00000159216 D
runx3 Gasterosteus aculeatus ENSGACG00000007301 I
runx2b Gasterosteus aculeatus ENSGACG00000012322 I
RUNX1 Gasterosteus aculeatus ENSGACG00000015276 I
RUNX1 Gallus gallus ENSGALG00000016022 I
ENSGALG00000026484 Gallus gallus ENSGALG00000026484 I
ENSGALG00000026821 Gallus gallus ENSGALG00000026821 I
RUNX3 Gorilla gorilla ENSGGOG00000004848 I
RUNX1 Gorilla gorilla ENSGGOG00000012862 I
RUNX2 Gorilla gorilla ENSGGOG00000012890 I
ENSGMOG00000014088 Gadus morhua ENSGMOG00000014088 I
ENSLACG00000011545 Latimeria chalumnae ENSLACG00000011545 I
ENSLACG00000013776 Latimeria chalumnae ENSLACG00000013776 I
ENSLACG00000015930 Latimeria chalumnae ENSLACG00000015930 I
RUNX1 Loxodonta africana ENSLAFG00000004290 I
RUNX2 Loxodonta africana ENSLAFG00000005054 I
RUNX3 Loxodonta africana ENSLAFG00000008382 I
ENSLOCG00000002744 Lepisosteus oculatus ENSLOCG00000002744 I
ENSLOCG00000015816 Lepisosteus oculatus ENSLOCG00000015816 I
ENSMEUG00000014419 Macropus eugenii ENSMEUG00000014419 I
RUNX2 Meleagris gallopavo ENSMGAG00000014267 I
ENSMGAG00000014534 Meleagris gallopavo ENSMGAG00000014534 I
RUNX1 Microcebus murinus ENSMICG00000011998 I
RUNX2 Myotis lucifugus ENSMLUG00000000514 I
RUNX3 Myotis lucifugus ENSMLUG00000003395 I
RUNX1 Macaca mulatta ENSMMUG00000001649 I
RUNX3 Macaca mulatta ENSMMUG00000002420 I
RUNX2 Macaca mulatta ENSMMUG00000019819 I
ENSMODG00000013941 Monodelphis domestica ENSMODG00000013941 I
RUNX2 Monodelphis domestica ENSMODG00000018912 I
RUNX1 Monodelphis domestica ENSMODG00000021051 I
ENSMPUG00000001340 Mustela putorius furo ENSMPUG00000001340 I
ENSMPUG00000012508 Mustela putorius furo ENSMPUG00000012508 I
ENSMPUG00000015804 Mustela putorius furo ENSMPUG00000015804 I
Runx1 Mus musculus ENSMUSG00000022952 D
Runx2 Mus musculus ENSMUSG00000039153 D
Runx3 Mus musculus ENSMUSG00000070691 D
ENSNLEG00000003611 Nomascus leucogenys ENSNLEG00000003611 I
ENSNLEG00000004310 Nomascus leucogenys ENSNLEG00000004310 I
ENSNLEG00000009021 Nomascus leucogenys ENSNLEG00000009021 I
RUNX2 Ornithorhynchus anatinus ENSOANG00000008265 I
ENSOANG00000031074 Ornithorhynchus anatinus ENSOANG00000031074 I
ENSOARG00000006421 Ovis aries ENSOARG00000006421 I
ENSOARG00000013599 Ovis aries ENSOARG00000013599 I
ENSOCUG00000011739 Oryctolagus cuniculus ENSOCUG00000011739 I
RUNX1 Oryctolagus cuniculus ENSOCUG00000013731 I
RUNX3 Oryctolagus cuniculus ENSOCUG00000017751 I
RUNX2 Otolemur garnettii ENSOGAG00000003900 I
RUNX3 Otolemur garnettii ENSOGAG00000025633 I
RUNX1 Otolemur garnettii ENSOGAG00000033362 I
ENSONIG00000001436 Oreochromis niloticus ENSONIG00000001436 I
ENSONIG00000004914 Oreochromis niloticus ENSONIG00000004914 I
ENSONIG00000008210 Oreochromis niloticus ENSONIG00000008210 I
ENSOPRG00000000765 Ochotona princeps ENSOPRG00000000765 I
RUNX2 Ochotona princeps ENSOPRG00000002943 I
RUNX3 Ochotona princeps ENSOPRG00000011273 I
runx3 Oryzias latipes ENSORLG00000017515 I
ENSP00000300305 Macaca fascicularis ENSP00000300305 I
ENSP00000352514 Macaca fascicularis ENSP00000352514 I
ENSP00000409227-D1 Bos grunniens ENSP00000409227-D1 I
ENSPANG00000006186 Papio anubis ENSPANG00000006186 I
ENSPANG00000007357 Papio anubis ENSPANG00000007357 I
ENSPANG00000008140 Papio anubis ENSPANG00000008140 I
ENSPFOG00000003997 Poecilia formosa ENSPFOG00000003997 I
ENSPPYG00000001714 Pongo abelii ENSPPYG00000001714 I
ENSPPYG00000011394 Pongo abelii ENSPPYG00000011394 I
ENSPPYG00000016664 Pongo abelii ENSPPYG00000016664 I
ENSPSIG00000012728 Pelodiscus sinensis ENSPSIG00000012728 I
ENSPSIG00000014293 Pelodiscus sinensis ENSPSIG00000014293 I
ENSPSIG00000017547 Pelodiscus sinensis ENSPSIG00000017547 I
RUNX3 Pan troglodytes ENSPTRG00000000351 I
RUNX1 Pan troglodytes ENSPTRG00000013883 I
RUNX2 Pan troglodytes ENSPTRG00000018228 I
RUNX1 Pteropus vampyrus ENSPVAG00000001606 I
Runx1 Rattus norvegicus ENSRNOG00000001704 I
Runx2 Rattus norvegicus ENSRNOG00000020193 I
Runx3 Rattus norvegicus ENSRNOG00000054217 I
ENSSHAG00000009950 Sarcophilus harrisii ENSSHAG00000009950 I
ENSSHAG00000012559 Sarcophilus harrisii ENSSHAG00000012559 I
ENSSHAG00000014782 Sarcophilus harrisii ENSSHAG00000014782 I
ENSSSCG00000012051 Sus scrofa ENSSSCG00000012051 I
ENSSTOG00000010163 Ictidomys tridecemlineatus ENSSTOG00000010163 I
ENSSTOG00000022471 Ictidomys tridecemlineatus ENSSTOG00000022471 I
RUNX2 Tupaia belangeri ENSTBEG00000000948 I
RUNX3 Taeniopygia guttata ENSTGUG00000001130 I
RUNX2 Taeniopygia guttata ENSTGUG00000013249 I
runx3 Tetraodon nigroviridis ENSTNIG00000016911 I
ENSTNIG00000018690 Tetraodon nigroviridis ENSTNIG00000018690 I
runx3 Takifugu rubripes ENSTRUG00000001517 I
runx2 Takifugu rubripes ENSTRUG00000003501 I
runx1 Takifugu rubripes ENSTRUG00000012611 I
ENSTSYG00000005097 Tarsius syrichta ENSTSYG00000005097 I
RUNX2 Tursiops truncatus ENSTTRG00000006943 I
RUNX3 Tursiops truncatus ENSTTRG00000009396 I
RUNX1 Tursiops truncatus ENSTTRG00000014160 I
ENSXMAG00000018835 Xiphophorus maculatus ENSXMAG00000018835 I
GK25373 Drosophila willistoni FBgn0227332 I
Gfo_R000714 Geospiza fortis Gfo_R000714 I
Gfo_R011596 Geospiza fortis Gfo_R011596 I
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I
LLOJ002717 Lutzomyia longipalpis LLOJ002717 I
MCINX000302 Melitaea cinxia MCINX000302 I
MESCA007078 Megaselia scalaris MESCA007078 I
Myotis_brandtii_RUNX2_10026084 Myotis brandtii Myotis_brandtii_RUNX2_10026084 I
NV11000 Nasonia vitripennis NV11000 I
Ogr17914 Ophisaurus gracilis Ogr17914 I
PPAI006591 Phlebotomus papatasi PPAI006591 I
Pvit_01165 Pogona vitticeps Pvit_01165 I
Pvit_04762 Pogona vitticeps Pvit_04762 I
Pvit_17193 Pogona vitticeps Pvit_17193 I
RPRC005391 Rhodnius prolixus RPRC005391 I
Sakowv30005496m.g Saccoglossus kowalevskii Sakowv30005496m.g I
SINV13317 Solenopsis invicta SINV13317 I
Tal_R011874 Tyto alba Tal_R011874 I
TC005566 Tribolium castaneum TC005566 I
TC005796 Tribolium castaneum TC005796 I
TC006536 Tribolium castaneum TC006536 I
tetur01g02340 Tetranychus urticae tetur01g02340 I
runx2 Xenopus tropicalis XB-GENE-482021 I
runx3 Xenopus tropicalis XB-GENE-487784 I
runx3.L Xenopus laevis XB-GENE-6487158 I
runx2.L Xenopus laevis XB-GENE-864817 I
runx1.L Xenopus laevis XB-GENE-864949 I
XP_002165633.1 Hydra magnipapillata XP_002165633.1 I
XP_002939386 Xenopus tropicalis XP_002939386 I
XP_002939387 Xenopus tropicalis XP_002939387 I
XP_002939388 Xenopus tropicalis XP_002939388 I
YQE_12218 Dendroctonus ponderosae YQE_12218 I