Cagra.1636s0011 (Capsella grandiflora)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Cagra.1636s0011 T261446_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1636s0011.1.p MBD 83 156

Links

Other MBD family TFs
Other Capsella grandiflora TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27791.m000083 Ricinus communis 27791.m000083 N
Aquca_032_00102 Aquilegia coerulea Aquca_032_00102 N
Aquca_044_00077 Aquilegia coerulea Aquca_044_00077 N
ATNFXL1 Arabidopsis thaliana AT1G10170 N
Bo5g010600 Brassica oleracea Bo5g010600 N
Bo8g059130 Brassica oleracea Bo8g059130 N
Bostr.13671s0471 Boechera stricta Bostr.13671s0471 N
Bra018458 Brassica rapa Bra018458 N
Bra019958 Brassica rapa Bra019958 N
Bra031704 Brassica rapa Bra031704 N
Cagra.1508s0074 Capsella grandiflora Cagra.1508s0074 N
Carubv10008145m.g Capsella rubella Carubv10008145m.g N
cassava4965.m1 Manihot esculenta cassava4965.m1 N
Ca_16794 Cicer arietinum Ca_16794 N
Ciclev10018607m.g Citrus clementina Ciclev10018607m.g N
Cla018720 Citrullus lanatus Cla018720 N
Cucsa.122080 Cucumis sativus Cucsa.122080 N
Eucgr.H00552 Eucalyptus grandis Eucgr.H00552 N
Eucgr.K02284 Eucalyptus grandis Eucgr.K02284 N
fgenesh1_pg.C_scaffold_1003098 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003098 N
GLYMA07G11834 Glycine max GLYMA07G11834 N
GLYMA08G06040 Glycine max GLYMA08G06040 N
GLYMA09G30343 Glycine max GLYMA09G30343 N
Gorai.006G058600 Gossypium raimondii Gorai.006G058600 N
GRMZM2G087787 Zea mays GRMZM2G087787 N
Lus10025071.g Linum usitatissimum Lus10025071.g N
Lus10034470.g Linum usitatissimum Lus10034470.g N
MDP0000280911 Malus domestica MDP0000280911 N
orange1.1g001378m.g Citrus sinensis orange1.1g001378m.g N
PK00983.1 Cannabis sativa PK00983.1 N
Pm025049 Prunus mume Pm025049 N
POPTR_0012s04070 Populus trichocarpa POPTR_0012s04070 N
PRUPE_ppa000543mg Prunus persica PRUPE_ppa000543mg N
SapurV1A.0082s0290 Salix purpurea SapurV1A.0082s0290 N
Sb04g038100 Sorghum bicolor Sb04g038100 N
Sb10g009070 Sorghum bicolor Sb10g009070 N
TCM_012484 Theobroma cacao TCM_012484 N
TCM_017029 Theobroma cacao TCM_017029 N
Thhalv10006708m.g Eutrema salsugineum Thhalv10006708m.g N