chr5.CM0909.10.nc (Lotus japonicus)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 chr5.CM0909.10.nc T261694_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr5.CM0909.10.nc MBD 67 140

Links

Other MBD family TFs
Other Lotus japonicus TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29703.m001533 Ricinus communis 29703.m001533 N 0.743
Bostr.13158s0305 Boechera stricta Bostr.13158s0305 N 0.716
Cagra.0664s0040 Capsella grandiflora Cagra.0664s0040 N 0.716
Carubv10018085m.g Capsella rubella Carubv10018085m.g N 0.716
Ca_08314 Cicer arietinum Ca_08314 N 0.824
gene27736-v1.0-hybrid Fragaria vesca gene27736-v1.0-hybrid N 0.703
GLYMA02G16930 Glycine max GLYMA02G16930 N 0.851
GLYMA10G02860 Glycine max GLYMA10G02860 N 0.851
LjSGA_013286.1 Lotus japonicus LjSGA_013286.1 N 0.851
Lus10027980.g Linum usitatissimum Lus10027980.g N 0.703
MDP0000216740 Malus domestica MDP0000216740 N 0.716
MDP0000315483 Malus domestica MDP0000315483 N 0.743
MDP0000403994 Malus domestica MDP0000403994 N 0.716
MTR_1g089750 Medicago truncatula MTR_1g089750 N 0.797
Pm019897 Prunus mume Pm019897 N 0.784
MBD4 Arabidopsis lyrata scaffold_503585.1 N 0.716