Bra021038 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra021038 T267935_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KAN2
M07018_2.00 		Arabidopsis thaliana
HHHNDWATATTCTYH
DRAGAATATWHNDDD		 Dap-seq
OMalley et al.(2016)
KAN2_col_a 		0.860 0.936
KAN2
M07019_2.00 		Arabidopsis thaliana
NWWTATTCYYH
DRRGAATAWWN		 Dap-seq
OMalley et al.(2016)
KAN2_colamp_a 		0.860 0.936
KAN4
M00881_2.00 		Arabidopsis thaliana
NWNRTBCNN
NNGVAYNWN		 PBM
Franco-Zorrilla et al.(2014)
KAN4 		0.835 0.936
KAN1
M00878_2.00 		Arabidopsis thaliana
NNRTNBNN
NNVNAYNN		 PBM
Franco-Zorrilla et al.(2014)
KAN1 		0.826 0.894
KAN1
M02308_2.00 		Arabidopsis thaliana
NDNDTAHNHN
NDNDTAHNHN		 PBM
Weirauch et al.(2014)
pTH7135 		0.826 0.894
AT1G14600
M01268_2.00 		Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN		 PBM
Lambert et al.(2019)
pTH11557 		0.667 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra021038.1-P Myb 59 110

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

356 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011824 Calypte anna Aan_R011824 I
Afo_R002575 Aptenodytes forsteri Afo_R002575 I
Alligator_sinensis_CCG009270.1 Alligator sinensis Alligator_sinensis_CCG009270.1 I
Brh_R009664 Buceros rhinoceros Brh_R009664 I
Cmyd_10006544 Chelonia mydas Cmyd_10006544 I
NFKB2 Anolis carolinensis ENSACAG00000014215 I
ENSAMEG00000017735 Ailuropoda melanoleuca ENSAMEG00000017735 I
ENSAPLG00000013409 Anas platyrhynchos ENSAPLG00000013409 I
NFKB2 Bos taurus ENSBTAG00000006017 I
ENSBTAP00000007904-D1 Bos grunniens ENSBTAP00000007904-D1 I
NFKB2 Canis familiaris ENSCAFG00000010155 I
NFKB2 Callithrix jacchus ENSCJAG00000017928 I
NFKB2 Cavia porcellus ENSCPOG00000004847 I
ENSCSAG00000005442 Chlorocebus sabaeus ENSCSAG00000005442 I
NFKB2 Dasypus novemcinctus ENSDNOG00000032784 I
Nfkb2 Dipodomys ordii ENSDORG00000013409 I
NFKB2 Equus caballus ENSECAG00000019593 I
NFKB2 Echinops telfairi ENSETEG00000002347 I
ENSFALG00000007271 Ficedula albicollis ENSFALG00000007271 I
NFKB2 Felis catus ENSFCAG00000001242 I
NFKB2 Homo sapiens ENSG00000077150 D
NFKB2 Gallus gallus ENSGALG00000005653 I
NFKB2 Gorilla gorilla ENSGGOG00000006971 I
NFKB2 Loxodonta africana ENSLAFG00000006805 I
ENSMEUG00000011176 Macropus eugenii ENSMEUG00000011176 I
ENSMGAG00000007084 Meleagris gallopavo ENSMGAG00000007084 I
NFKB2 Microcebus murinus ENSMICG00000011856 I
NFKB2 Myotis lucifugus ENSMLUG00000006287 I
NFKB2 Macaca mulatta ENSMMUG00000002990 I
ENSMPUG00000016882 Mustela putorius furo ENSMPUG00000016882 I
Nfkb2 Mus musculus ENSMUSG00000025225 D
Nfkb1 Mus musculus ENSMUSG00000028163 D
ENSNLEG00000015079 Nomascus leucogenys ENSNLEG00000015079 I
ENSOANG00000006254 Ornithorhynchus anatinus ENSOANG00000006254 I
ENSOANG00000028755 Ornithorhynchus anatinus ENSOANG00000028755 I
ENSOANG00000030023 Ornithorhynchus anatinus ENSOANG00000030023 I
ENSOARG00000000483 Ovis aries ENSOARG00000000483 I
NFKB2 Oryctolagus cuniculus ENSOCUG00000005735 I
NFKB2 Otolemur garnettii ENSOGAG00000016379 I
NFKB2 Ochotona princeps ENSOPRG00000006569 I
ENSP00000189444 Macaca fascicularis ENSP00000189444 I
ENSPANG00000021013 Papio anubis ENSPANG00000021013 I
NFKB2 Procavia capensis ENSPCAG00000011503 I
ENSPPYG00000002599 Pongo abelii ENSPPYG00000002599 I
NFKB2 Pan troglodytes ENSPTRG00000002888 I
Nfkb2 Rattus norvegicus ENSRNOG00000019311 I
NFKB2 Sorex araneus ENSSARG00000006180 I
ENSSHAG00000018852 Sarcophilus harrisii ENSSHAG00000018852 I
NFKB2 Sus scrofa ENSSSCG00000010580 I
NFKB1 Sus scrofa ENSSSCG00000030957 I
ENSSTOG00000002191 Ictidomys tridecemlineatus ENSSTOG00000002191 I
NFKB2 Taeniopygia guttata ENSTGUG00000007491 I
NFKB2 Tursiops truncatus ENSTTRG00000008357 I
Gfo_R002459 Geospiza fortis Gfo_R002459 I
Myotis_brandtii_NFKB2_10025917 Myotis brandtii Myotis_brandtii_NFKB2_10025917 I
Ogr18048 Ophisaurus gracilis Ogr18048 I
Pvit_13855 Pogona vitticeps Pvit_13855 I
nfkb2 Xenopus tropicalis XB-GENE-970084 I