CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Bra025311 *(Brassica rapa)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	Bra025311	T267982_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
WER M11047_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WEREWOLF_Q2_01	0.786	0.892
WER M11048_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WEREWOLF_Q2	0.786	0.892
MYB23 M07133_2.00	Arabidopsis thaliana	HCAACWAHHHH	DDDDTWGTTGD	Dap-seq OMalley et al.(2016) MYB23_col_a	0.754	0.882
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Bra025311.1-P	Myb	17	64	KGLWTVEEDNILRDYVLTHGKGQWNRIVRKTGLKRCGKSCRLRWINYL
Bra025311.1-P	Myb	70	115	KGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNHWNTHL

Links
Other Myb/SANT family TFs
Other *Brassica rapa* TFs