GSMUA_Achr3G13070_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr3G13070_001 T272393_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.787 0.892
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.783 0.903
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.783 0.892
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.783 0.892
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.766 0.839
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.766 0.839
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.766 0.839
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.740 0.817
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.740 0.817
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.740 0.817
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.740 0.817
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.740 0.817
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.732 0.774
MYB1
M07068_2.00 		Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD		 Dap-seq
OMalley et al.(2016)
MYB1_col_a 		0.666 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr3P13070_001 Myb 21 67
GSMUA_Achr3P13070_001 Myb 73 118

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

322 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000798501 Angiostrongylus cantonensis ACAC_0000798501 N 0.000
ACAC_0000857301 Angiostrongylus cantonensis ACAC_0000857301 N 0.000
ACOC_0000653601 Angiostrongylus costaricensis ACOC_0000653601 N 0.000
ACOC_0001190001 Angiostrongylus costaricensis ACOC_0001190001 N 0.000
ALUE_0000448701 Ascaris lumbricoides ALUE_0000448701 N 0.000
ALUE_0000605501 Ascaris lumbricoides ALUE_0000605501 N 0.000
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I 0.000
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.000
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.000
ANCCAN_19939 Ancylostoma caninum ANCCAN_19939 N 0.000
ANCCAN_21637 Ancylostoma caninum ANCCAN_21637 N 0.000
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.000
ANCCEY_10464 Ancylostoma ceylanicum ANCCEY_10464 N 0.000
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.000
ANCDUO_11855 Ancylostoma duodenale ANCDUO_11855 N 0.000
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.000
ANCDUO_24269 Ancylostoma duodenale ANCDUO_24269 N 0.000
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.000
ANCDUO_26276 Ancylostoma duodenale ANCDUO_26276 N 0.000
ASIM_0000156001 Anisakis simplex ASIM_0000156001 N 0.000
ASU_05752 Ascaris suum ASU_05752 N 0.000
ASU_07820 Ascaris suum ASU_07820 N 0.000
Bm6643 Brugia malayi Bm6643 N 0.000
BTMF_0000229601 Brugia timori BTMF_0000229601 N 0.000
CBG20663 Caenorhabditis briggsae CBG20663 N 0.000
DICVIV_01337 Dictyocaulus viviparus DICVIV_01337 N 0.000
DME_0000590001 Dracunculus medinensis DME_0000590001 N 0.000
EEL_0000629001 Elaeophora elaphi EEL_0000629001 N 0.000
EFV62220 Trichinella spiralis EFV62220 N 0.000
EVEC_0000171701 Enterobius vermicularis EVEC_0000171701 N 0.000
GPUH_0000029001 Gongylonema pulchrum GPUH_0000029001 N 0.000
HCOI00417600 Haemonchus contortus HCOI00417600 N 0.000
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.000
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.000
HPBE_0000066401 Heligmosomoides bakeri HPBE_0000066401 N 0.000
HPBE_0001796801 Heligmosomoides bakeri HPBE_0001796801 N 0.000
HPBE_0002310801 Heligmosomoides bakeri HPBE_0002310801 N 0.000
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.000
HPLM_0000803901 Haemonchus placei HPLM_0000803901 N 0.000
L596_g8199 Steinernema carpocapsae L596_g8199 N 0.000
L889_g29516 Steinernema feltiae L889_g29516 N 0.000
L892_g2503 Steinernema scapterisci L892_g2503 N 0.000
LOAG_14354 Loa loa LOAG_14354 N 0.000
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.000
mgf006762m Mimulus guttatus mgf006762m N 0.000
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.000
Minc03634 Meloidogyne incognita Minc03634 N 0.000
Minc04648 Meloidogyne incognita Minc04648 N 0.000
nAv.1.0.1.g09805 Acanthocheilonema viteae nAv.1.0.1.g09805 N 0.000
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.000
NBR_0001132501 Nippostrongylus brasiliensis NBR_0001132501 N 0.000
nDi.2.2.2.g04713 Dirofilaria immitis nDi.2.2.2.g04713 N 0.000
NECAME_10840 Necator americanus NECAME_10840 N 0.000
NECAME_16525 Necator americanus NECAME_16525 N 0.000
NEMVEDRAFT_v1g59568 Nematostella vectensis NEMVEDRAFT_v1g59568 N 0.000
nLs.2.1.2.g02941 Litomosoides sigmodontis nLs.2.1.2.g02941 N 0.000
nOo.2.0.1.g01970 Onchocerca ochengi nOo.2.0.1.g01970 N 0.000
OESDEN_18796 Oesophagostomum dentatum OESDEN_18796 N 0.000
OFLC_0000496201 Onchocerca flexuosa OFLC_0000496201 N 0.000
PPA06513 Pristionchus pacificus PPA06513 N 0.000
PPA12247 Pristionchus pacificus PPA12247 N 0.000
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.000
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.000
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N 0.000
RSKR_0000269200 Rhabditophanes kr3021 RSKR_0000269200 N 0.000
Sakowv30021656m.g Saccoglossus kowalevskii Sakowv30021656m.g N 0.000
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.000
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.000
scaffold593-EXSNAP2012.5 Pristionchus exspectatus scaffold593-EXSNAP2012.5 N 0.000
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N 0.000
SMUV_0000634201 Syphacia muris SMUV_0000634201 N 0.000
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.000
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.000
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.000
SVUK_0001398701 Strongylus vulgaris SVUK_0001398701 N 0.000
SVUK_0001721701 Strongylus vulgaris SVUK_0001721701 N 0.000
TCM_014800 Theobroma cacao TCM_014800 N 0.000
TELCIR_05217 Teladorsagia circumcincta TELCIR_05217 N 0.000
TELCIR_22690 Teladorsagia circumcincta TELCIR_22690 N 0.000
WUBG_02390 Wuchereria bancrofti WUBG_02390 N 0.000