LPERR06G20610 (Leersia perrieri)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 LPERR06G20610 T273760_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gam1
M02703_2.00 		Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN		 SELEX
Mathelier et al.(2014)
MA0034.1 		0.662 0.710
Gam1
M11061_2.00 		Hordeum vulgare
YAACSRHM
KDYSGTTR		 Transfac
Matys et al.(2006)
P$GAMYB_01 		0.662 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR06G20610.1 Myb 14 61
LPERR06G20610.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Leersia perrieri TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29823.m000215 Ricinus communis 29823.m000215 I 0.667
AC217264.3_FG005 Zea mays AC217264.3_FG005 I 0.664
AMTR_s00037p00177500 Amborella trichopoda AMTR_s00037p00177500 I 0.661
BGIOSGA020673 Oryza indica BGIOSGA020673 I 0.855
BRADI1G32720 Brachypodium distachyon BRADI1G32720 I 0.794
BRADI2G53010 Brachypodium distachyon BRADI2G53010 I 0.662
cassava11031.m1 Manihot esculenta cassava11031.m1 I 0.667
Ciclev10010620m.g Citrus clementina Ciclev10010620m.g I 0.663
Cla005406 Citrullus lanatus Cla005406 I 0.662
evm.TU.supercontig_12.292 Carica papaya evm.TU.supercontig_12.292 I 0.681
F775_00954 Aegilops tauschii F775_00954 I 0.793
F775_08967 Aegilops tauschii F775_08967 I 0.690
F775_14392 Aegilops tauschii F775_14392 I 0.751
F775_23034 Aegilops tauschii F775_23034 I 0.688
F775_28392 Aegilops tauschii F775_28392 I 0.662
gene03321-v1.0-hybrid Fragaria vesca gene03321-v1.0-hybrid I 0.666
gene03323-v1.0-hybrid Fragaria vesca gene03323-v1.0-hybrid I 0.666
GLYMA04G15150 Glycine max GLYMA04G15150 I 0.675
GLYMA06G47000 Glycine max GLYMA06G47000 I 0.675
Gorai.007G312700 Gossypium raimondii Gorai.007G312700 I 0.687
Gorai.013G159200 Gossypium raimondii Gorai.013G159200 I 0.663
GRMZM2G070523 Zea mays GRMZM2G070523 I 0.664
GRMZM2G139688 Zea mays GRMZM2G139688 I 0.662
GRMZM2G161512 Zea mays GRMZM2G161512 N 0.819
GRMZM2G343068 Zea mays GRMZM2G343068 N 0.752
GSMUA_Achr4G23690_001 Musa acuminata GSMUA_Achr4G23690_001 I 0.707
GSMUA_Achr7G00280_001 Musa acuminata GSMUA_Achr7G00280_001 I 0.671
gw1.66.160.1 Physcomitrella patens gw1.66.160.1 I 0.679
LPERR06G17110 Leersia perrieri LPERR06G17110 N 0.662
Lus10027189.g Linum usitatissimum Lus10027189.g I 0.695
Lus10035275.g Linum usitatissimum Lus10035275.g I 0.695
MDP0000147309 Malus domestica MDP0000147309 I 0.688
MDP0000151688 Malus domestica MDP0000151688 I 0.672
MDP0000176798 Malus domestica MDP0000176798 I 0.672
MDP0000179306 Malus domestica MDP0000179306 I 0.666
MDP0000308617 Malus domestica MDP0000308617 I 0.669
mgf010934m Mimulus guttatus mgf010934m I 0.670
mgf019173m Mimulus guttatus mgf019173m I 0.670
MLOC_6041 Hordeum vulgare MLOC_6041 I 0.692
MTR_1g021230 Medicago truncatula MTR_1g021230 I 0.670
OB03G32840 Oryza brachyantha OB03G32840 I 0.671
OBART03G24120 Oryza barthii OBART03G24120 I 0.671
OGLUM03G24880 Oryza glumaepatula OGLUM03G24880 I 0.671
OGLUM06G26120 Oryza glumaepatula OGLUM06G26120 I 0.855
OLONG_025057 Oryza longistaminata OLONG_025057 I 0.671
OMERI03G21920 Oryza meridionalis OMERI03G21920 I 0.671
OMERI06G24960 Oryza meridionalis OMERI06G24960 I 0.855
ONIVA04G15310 Oryza nivara ONIVA04G15310 I 0.671
ONIVA06G28020 Oryza nivara ONIVA06G28020 I 0.855
OPUNC03G22220 Oryza punctata OPUNC03G22220 I 0.671
OPUNC06G22490 Oryza punctata OPUNC06G22490 I 0.855
orange1.1g046419m.g Citrus sinensis orange1.1g046419m.g I 0.663
ORGLA03G0224700 Oryza glaberrima ORGLA03G0224700 I 0.671
ORUFI03G24730 Oryza rufipogon ORUFI03G24730 I 0.671
ORUFI06G26670 Oryza rufipogon ORUFI06G26670 I 0.855
OS03G0578900 Oryza sativa OS03G0578900 I 0.671
OS06G0679400 Oryza sativa OS06G0679400 I 0.855
Pavir.Da00077 Panicum virgatum Pavir.Da00077 I 0.835
Pavir.Db00593 Panicum virgatum Pavir.Db00593 I 0.846
Pavir.Ea03206 Panicum virgatum Pavir.Ea03206 I 0.662
Pavir.Ib03827 Panicum virgatum Pavir.Ib03827 I 0.697
PRUPE_ppa019943mg Prunus persica PRUPE_ppa019943mg I 0.666
Gam1 Hordeum vulgare Q96464_HORVU D 0.662
Sb01g015920 Sorghum bicolor Sb01g015920 I 0.664
Sb10g027280 Sorghum bicolor Sb10g027280 I 0.849
Si000907m.g Setaria italica Si000907m.g I 0.662
Si006555m.g Setaria italica Si006555m.g I 0.846
Si039629m.g Setaria italica Si039629m.g I 0.697
TCM_011907 Theobroma cacao TCM_011907 I 0.665
TRAES3BF027700010CFD_g Triticum aestivum TRAES3BF027700010CFD_g I 0.662
Traes_6AS_5562B97F7 Triticum aestivum Traes_6AS_5562B97F7 I 0.751
Traes_6DS_A0EC5D808 Triticum aestivum Traes_6DS_A0EC5D808 I 0.751
Traes_7AL_0AD4A7A87 Triticum aestivum Traes_7AL_0AD4A7A87 I 0.793
Traes_7DL_FAF2AE9FB Triticum aestivum Traes_7DL_FAF2AE9FB I 0.793
TRIUR3_15006 Triticum urartu TRIUR3_15006 I 0.680
TRIUR3_17146 Triticum urartu TRIUR3_17146 I 0.793
TRIUR3_20797 Triticum urartu TRIUR3_20797 I 0.688
TRIUR3_22706 Triticum urartu TRIUR3_22706 I 0.751
TRIUR3_27104 Triticum urartu TRIUR3_27104 I 0.662
MYB101 Vitis vinifera VIT_12s0059g00700 I 0.688