MLOC_68189 (Hordeum vulgare)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MLOC_68189 T274565_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.909 0.978
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.901 0.957
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.901 0.957
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.901 0.957
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.901 0.957
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.901 0.957
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.899 0.957
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.899 0.957
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.899 0.957
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.818 0.870
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.803 0.913
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.803 0.913
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.803 0.913
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.706 0.696
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.670 0.652
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.670 0.652
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.670 0.652
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_68189.1 Myb 35 80
MLOC_68189.2 Myb 35 80
MLOC_68189.3 Myb 35 80
MLOC_68189.4 Myb 35 80
MLOC_68189.5 Myb 35 80
MLOC_68189.7 Myb 35 80
MLOC_68189.8 Myb 35 80
MLOC_68189.9 Myb 35 80

Links

Other Myb/SANT family TFs
Other Hordeum vulgare TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF454 Bos taurus ENSBTAG00000004262 I
ENSBTAP00000016859-D1 Bos grunniens ENSBTAP00000016859-D1 I
ZNF454 Canis familiaris ENSCAFG00000031168 I
ZNF454 Choloepus hoffmanni ENSCHOG00000002770 I
ENSCSAG00000008562 Chlorocebus sabaeus ENSCSAG00000008562 I
ZNF454 Equus caballus ENSECAG00000005115 I
ZNF454 Erinaceus europaeus ENSEEUG00000007684 I
ZNF454 Felis catus ENSFCAG00000021971 I
ZNF454 Homo sapiens ENSG00000178187 D
ZNF454 Gorilla gorilla ENSGGOG00000022508 I
ZNF454 Myotis lucifugus ENSMLUG00000002894 I
ENSMMUG00000008980 Macaca mulatta ENSMMUG00000008980 I
ENSMPUG00000000725 Mustela putorius furo ENSMPUG00000000725 I
Zfp454 Mus musculus ENSMUSG00000048728 I
ENSNLEG00000001430 Nomascus leucogenys ENSNLEG00000001430 I
ENSOARG00000004411 Ovis aries ENSOARG00000004411 I
ZNF454 Oryctolagus cuniculus ENSOCUG00000029119 I
ZNF454 Ochotona princeps ENSOPRG00000009035 I
ENSP00000326249 Macaca fascicularis ENSP00000326249 I
ENSPANG00000009509 Papio anubis ENSPANG00000009509 I
ZNF454 Pan troglodytes ENSPTRG00000017611 I
ZNF454 Pteropus vampyrus ENSPVAG00000007676 I
Znf454 Rattus norvegicus ENSRNOG00000022971 I
ZNF454 Sus scrofa ENSSSCG00000027351 I
ZNF454 Tupaia belangeri ENSTBEG00000000346 I
ZNF454 Tursiops truncatus ENSTTRG00000012880 I