OBART04G04830 (Oryza barthii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OBART04G04830 T275499_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.753 0.817
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.753 0.817
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART04G04830.1 Myb 14 62
OBART04G04830.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Oryza barthii TFs

427 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000004412 Ailuropoda melanoleuca ENSAMEG00000004412 N 0.000
MYCL Bos taurus ENSBTAG00000006338 N 0.000
ENSBTAP00000050548-D1 Bos grunniens ENSBTAP00000050548-D1 N 0.000
MYCL Canis familiaris ENSCAFG00000003022 N 0.000
ENSCJAG00000002700 Callithrix jacchus ENSCJAG00000002700 N 0.000
ENSCPOG00000012827 Cavia porcellus ENSCPOG00000012827 N 0.000
ENSCSAG00000001138 Chlorocebus sabaeus ENSCSAG00000001138 N 0.000
MYCL Dasypus novemcinctus ENSDNOG00000001996 N 0.000
MYCL Equus caballus ENSECAG00000008765 N 0.000
MYCL Erinaceus europaeus ENSEEUG00000004078 N 0.000
MYCL Felis catus ENSFCAG00000022640 N 0.000
MYCL Homo sapiens ENSG00000116990 N 0.000
MYCL Gorilla gorilla ENSGGOG00000001693 N 0.000
ENSLAFG00000001935 Loxodonta africana ENSLAFG00000001935 N 0.000
ENSMEUG00000000536 Macropus eugenii ENSMEUG00000000536 N 0.000
MYCL Myotis lucifugus ENSMLUG00000000337 N 0.000
MYCL Macaca mulatta ENSMMUG00000016223 N 0.000
ENSMMUP00000021322 Macaca fascicularis ENSMMUP00000021322 N 0.000
MYCL Monodelphis domestica ENSMODG00000017647 N 0.000
ENSMPUG00000014286 Mustela putorius furo ENSMPUG00000014286 N 0.000
Mycl Mus musculus ENSMUSG00000028654 N 0.000
ENSNLEG00000012063 Nomascus leucogenys ENSNLEG00000012063 N 0.000
ENSOARG00000020147 Ovis aries ENSOARG00000020147 N 0.000
MYCL Oryctolagus cuniculus ENSOCUG00000025113 N 0.000
MYCL Otolemur garnettii ENSOGAG00000015380 N 0.000
MYCL Ochotona princeps ENSOPRG00000003229 N 0.000
ENSPANG00000010238 Papio anubis ENSPANG00000010238 N 0.000
ENSPPYG00000001498 Pongo abelii ENSPPYG00000001498 N 0.000
MYCL Pan troglodytes ENSPTRG00000000580 N 0.000
MYCL Pteropus vampyrus ENSPVAG00000003347 N 0.000
Mycl Rattus norvegicus ENSRNOG00000014259 N 0.000
ENSSHAG00000018449 Sarcophilus harrisii ENSSHAG00000018449 N 0.000
ENSSSCG00000003668 Sus scrofa ENSSSCG00000003668 N 0.000
ENSSTOG00000005037 Ictidomys tridecemlineatus ENSSTOG00000005037 N 0.000
ENSTSYG00000009275 Tarsius syrichta ENSTSYG00000009275 N 0.000
MYCL Tursiops truncatus ENSTTRG00000005113 N 0.000
Myotis_brandtii_MYCL1_10028964 Myotis brandtii Myotis_brandtii_MYCL1_10028964 N 0.000
mycl Xenopus tropicalis XB-GENE-6453835 N 0.000