PGSC0003DMG400020344 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400020344 T277648_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
fgenesh1_pg.scaffold_70000111
M02342_2.00 		Physcomitrella patens
NNHNATCBN
NVGATNDNN		 PBM
Weirauch et al.(2014)
pTH8492 		0.768 0.872
AT2G38090
M07055_2.00 		Arabidopsis thaliana
HHBAWNYTTATCYWNWHYNBN
NVNRDWNWRGATAARNWTVDD		 Dap-seq
OMalley et al.(2016)
At2g38090_col_a 		0.718 0.840
KUA1
M02312_2.00 		Arabidopsis thaliana
NNTTATCCDN
NHGGATAANN		 PBM
Weirauch et al.(2014)
pTH7647 		0.759 0.846
PK27693.1
M01285_2.00 		Cannabis sativa
NNYTATCBNN
NNVGATARNN		 PBM
Lambert et al.(2019)
pTH11302 		0.709 0.840
KUA1
M07136_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWW
WWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a 		0.759 0.846
PK27213.1
M01284_2.00 		Cannabis sativa
NHWATCNNNN
NNNNGATWDN		 PBM
Lambert et al.(2019)
pTH10196 		0.680 0.819
PK27213.1
M02356_2.00 		Cannabis sativa
NHHATCNNNN
NNNNGATDDN		 PBM
Weirauch et al.(2014)
pTH9600 		0.680 0.819
KUA1
M07137_2.00 		Arabidopsis thaliana
HHWDYHTTATCCAHW
WDTGGATAADRHWDD		 Dap-seq
OMalley et al.(2016)
At5g47390_col_b 		0.759 0.846
PK17526.1
M02353_2.00 		Cannabis sativa
NNTTATCCAN
NTGGATAANN		 PBM
Weirauch et al.(2014)
pTH9588 		0.750 0.846
AT3G16350
M01078_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Sullivan et al.(2014)
pTH7149 		0.747 0.795
AT5G56840
M07144_2.00 		Arabidopsis thaliana
WWYMTTATCCAWWWN
NWWWTGGATAAKRWW		 Dap-seq
OMalley et al.(2016)
AT5G56840_col_a 		0.742 0.795
AT5G56840
M07145_2.00 		Arabidopsis thaliana
HHHWWYHTTATCCWHW
WDWGGATAADRWWDDD		 Dap-seq
OMalley et al.(2016)
AT5G56840_colamp_a 		0.742 0.795
PK23829.1
M02355_2.00 		Cannabis sativa
VTTATCCD
HGGATAAB		 PBM
Weirauch et al.(2014)
pTH9592 		0.739 0.821
PK00738.1
M02346_2.00 		Cannabis sativa
NYWATCYDNN
NNHRGATWRN		 PBM
Weirauch et al.(2014)
pTH9487 		0.737 0.795
PK29550.1
M02358_2.00 		Cannabis sativa
NNHDATCYNN
NNRGATHDNN		 PBM
Weirauch et al.(2014)
pTH9595 		0.737 0.769
0600010132
M02360_2.00 		Ostreococcus tauri
NNVTTATCCDNNN
NNNHGGATAABNN		 PBM
Weirauch et al.(2014)
pTH9441 		0.732 0.795
AT5G61620
M07149_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWWN
NWWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
AT5G61620_col_a 		0.732 0.769
AT5G61620
M07150_2.00 		Arabidopsis thaliana
YHTTATCCAHW
WDTGGATAADR		 Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a 		0.732 0.769
AT1G19000
M02287_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Weirauch et al.(2014)
pTH7120 		0.726 0.769
AT1G19000
M07012_2.00 		Arabidopsis thaliana
HDYHTTATCCAHWW
WWDTGGATAADRHD		 Dap-seq
OMalley et al.(2016)
At1g19000_col_a 		0.726 0.769
AT1G19000
M07013_2.00 		Arabidopsis thaliana
WDYNTTATCCAHWW
WWDTGGATAANRHW		 Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a 		0.726 0.769
AT3G10580
M07072_2.00 		Arabidopsis thaliana
AWBCTTATCYWHWHH
DDWDWRGATAAGVWT		 Dap-seq
OMalley et al.(2016)
AT3G10580_col_a 		0.695 0.718
AT3G10580
M07073_2.00 		Arabidopsis thaliana
CCGAWAAWNTCGGDD
HHCCGANWTTWTCGG		 Dap-seq
OMalley et al.(2016)
AT3G10580_colamp_a 		0.695 0.718
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400052410 Myb 8 47
PGSC0003DMT400052411 Myb 131 178

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

625 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL011188 Aedes aegypti AAEL011188 N
AAEL014129 Aedes aegypti AAEL014129 N
AAEL015073 Aedes aegypti AAEL015073 N
AALB000412 Anopheles albimanus AALB000412 N
AALB000419 Anopheles albimanus AALB000419 N
AALB004779 Anopheles albimanus AALB004779 N
AALB008495 Anopheles albimanus AALB008495 I
AARA000518 Anopheles arabiensis AARA000518 I
AARA011011 Anopheles arabiensis AARA011011 N
AARA011018 Anopheles arabiensis AARA011018 N
AATE006365 Anopheles atroparvus AATE006365 N
AATE013760 Anopheles atroparvus AATE013760 I
AATE017887 Anopheles atroparvus AATE017887 N
ACEP16055 Atta cephalotes ACEP16055 N
ACEP16057 Atta cephalotes ACEP16057 N
ACEP16104 Atta cephalotes ACEP16104 N
ACEP18439 Atta cephalotes ACEP18439 N
ACEP18779 Atta cephalotes ACEP18779 N
ACEP25260 Atta cephalotes ACEP25260 N
ACHR005872 Anopheles christyi ACHR005872 N
ACHR009192 Anopheles christyi ACHR009192 I
ACOM023902 Anopheles coluzzii ACOM023902 N
ACOM023939 Anopheles coluzzii ACOM023939 N
ACOM024986 Anopheles coluzzii ACOM024986 N
ACUA016860 Anopheles culicifacies ACUA016860 N
ACUA020382 Anopheles culicifacies ACUA020382 I
ADAC010175 Anopheles darlingi ADAC010175 N
ADAC010219 Anopheles darlingi ADAC010219 N
ADIR000205 Anopheles dirus ADIR000205 I
ADIR010886 Anopheles dirus ADIR010886 N
ADIR010894 Anopheles dirus ADIR010894 N
AEPI001839 Anopheles epiroticus AEPI001839 N
AEPI004513 Anopheles epiroticus AEPI004513 I
AFAF006342 Anopheles farauti AFAF006342 I
AFAF009935 Anopheles farauti AFAF009935 N
AFAF009954 Anopheles farauti AFAF009954 N
AFAF014429 Anopheles farauti AFAF014429 N
AFAF020534 Anopheles farauti AFAF020534 N
AFUN001006 Anopheles funestus AFUN001006 I
AFUN010565 Anopheles funestus AFUN010565 N
AFUN010572 Anopheles funestus AFUN010572 N
AMAM002835 Anopheles maculatus AMAM002835 I
AMAM007431 Anopheles maculatus AMAM007431 N
AMAM018266 Anopheles maculatus AMAM018266 N
AMEC006545 Anopheles melas AMEC006545 N
AMEC008441 Anopheles melas AMEC008441 N
AMEC017817 Anopheles melas AMEC017817 I
AMEM000859 Anopheles merus AMEM000859 N
AMEM004241 Anopheles merus AMEM004241 N
AMEM006552 Anopheles merus AMEM006552 N
AMEM014259 Anopheles merus AMEM014259 N
AMIN000989 Anopheles minimus AMIN000989 N
AMIN000996 Anopheles minimus AMIN000996 N
AMIN008751 Anopheles minimus AMIN008751 I
ANCCAN_17995 Ancylostoma caninum ANCCAN_17995 N
ANCDUO_08930 Ancylostoma duodenale ANCDUO_08930 N
AQUA000252 Anopheles quadriannulatus AQUA000252 N
AQUA000259 Anopheles quadriannulatus AQUA000259 N
AQUA010988 Anopheles quadriannulatus AQUA010988 N
ASIM_0000332801 Anisakis simplex ASIM_0000332801 N
ASIM_0000883501 Anisakis simplex ASIM_0000883501 N
ASIM_0001369201 Anisakis simplex ASIM_0001369201 N
ASIS004860 Anopheles sinensis ASIS004860 N
ASIS022129 Anopheles sinensis ASIS022129 N
ASIS023746 Anopheles sinensis ASIS023746 N
ASTEI05182 Anopheles stephensi ASTEI05182 N
ASTEI08593 Anopheles stephensi ASTEI08593 I
augustus_masked-nMf.1.1.scaf00847-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf00847-processed-gene-0.0 N
A_01376 Schistosoma haematobium A_01376 N
A_07251 Schistosoma haematobium A_07251 N
BAG86626 Xenopus laevis BAG86626 N
BGIBMGA002993 Bombyx mori BGIBMGA002993 N
BGIBMGA003172 Bombyx mori BGIBMGA003172 N
BGIBMGA012896 Bombyx mori BGIBMGA012896 N
BGLB008488 Biomphalaria glabrata BGLB008488 N
BGLB013266 Biomphalaria glabrata BGLB013266 N
BTMF_0000314701 Brugia timori BTMF_0000314701 N
BTMF_0001014001 Brugia timori BTMF_0001014001 N
BXY_1202100 Bursaphelenchus xylophilus BXY_1202100 N
CAA04813 Xenopus laevis CAA04813 N
CapteG199350 Capitella teleta CapteG199350 N
Cflo_07687--XP_001122560.1_APIME Camponotus floridanus Cflo_07687--XP_001122560.1_APIME N
CGI_10019141 Crassostrea gigas CGI_10019141 N
CGI_10019474 Crassostrea gigas CGI_10019474 N
CGOC_0001405301 Cylicostephanus goldi CGOC_0001405301 N
CLEC007093 Cimex lectularius CLEC007093 N
CLEC007100 Cimex lectularius CLEC007100 N
CPIJ000431 Culex quinquefasciatus CPIJ000431 N
CPIJ000719 Culex quinquefasciatus CPIJ000719 I
CPIJ007737 Culex quinquefasciatus CPIJ007737 N
CpipJ_CPIJ000431 Culex pipiens CpipJ_CPIJ000431 N
CpipJ_CPIJ000719 Culex pipiens CpipJ_CPIJ000719 I
CpipJ_CPIJ007737 Culex pipiens CpipJ_CPIJ007737 N
D915_02168 Fasciola hepatica D915_02168 N
D915_09884 Fasciola hepatica D915_09884 N
D918_04294 Trichuris suis D918_04294 N
DICVIV_06159 Dictyocaulus viviparus DICVIV_06159 N
DME_0000913401 Dracunculus medinensis DME_0000913401 N
ECPE_0001424601 Echinostoma caproni ECPE_0001424601 N
EEL_0000193501 Elaeophora elaphi EEL_0000193501 N
EEL_0000897101 Elaeophora elaphi EEL_0000897101 N
Tbx15 Dipodomys ordii ENSDORG00000005620 N
ENSECAG00000002502 Equus caballus ENSECAG00000002502 I
ENSETEG00000015428 Echinops telfairi ENSETEG00000015428 I
TBX2 Homo sapiens ENSG00000121068 D
TBX22 Homo sapiens ENSG00000122145 D
ENSGACG00000000841 Gasterosteus aculeatus ENSGACG00000000841 N
TBX18 Gorilla gorilla ENSGGOG00000027982 I
ENSGMOG00000002691 Gadus morhua ENSGMOG00000002691 N
ENSGMOG00000010368 Gadus morhua ENSGMOG00000010368 N
ENSMEUG00000014480 Macropus eugenii ENSMEUG00000014480 I
Tbx5 Mus musculus ENSMUSG00000018263 D
Tbx15 Mus musculus ENSMUSG00000027868 I
ENSOANG00000002255 Ornithorhynchus anatinus ENSOANG00000002255 N
ENSOANG00000031362 Ornithorhynchus anatinus ENSOANG00000031362 I
ENSPMAG00000004017 Petromyzon marinus ENSPMAG00000004017 N
ENSPMAG00000006729 Petromyzon marinus ENSPMAG00000006729 N
ENSPMAG00000008021 Petromyzon marinus ENSPMAG00000008021 N
ENSSSCG00000006723 Sus scrofa ENSSSCG00000006723 I
TBX22 Sus scrofa ENSSSCG00000012449 I
ENSTGUG00000013354 Taeniopygia guttata ENSTGUG00000013354 I
EVEC_0000199201 Enterobius vermicularis EVEC_0000199201 N
GF19459 Drosophila ananassae FBgn0096468 N
Gfo_R000255 Geospiza fortis Gfo_R000255 I
GPUH_0000709501 Gongylonema pulchrum GPUH_0000709501 N
GPUH_0002107201 Gongylonema pulchrum GPUH_0002107201 N
Hba_09878 Heterorhabditis bacteriophora Hba_09878 N
HelroG183031 Helobdella robusta HelroG183031 N
HHAL002271-PA Halyomorpha halys HHAL002271-PA I
HHAL004081-PA Halyomorpha halys HHAL004081-PA N
HMEL012428 Heliconius melpomene HMEL012428 N
HPLM_0000022701 Haemonchus placei HPLM_0000022701 N
Hsal_04124--XP_001122560.1_APIME Harpegnathos saltator Hsal_04124--XP_001122560.1_APIME I
Hsal_09266--XP_394607.3_APIME Harpegnathos saltator Hsal_09266--XP_394607.3_APIME N
ISCW003118 Ixodes scapularis ISCW003118 N
ISCW019279 Ixodes scapularis ISCW019279 N
ISCW019282 Ixodes scapularis ISCW019282 N
ISCW019286 Ixodes scapularis ISCW019286 N
KGM_02027 Danaus plexippus KGM_02027 N
KGM_02039 Danaus plexippus KGM_02039 N
KGM_02695 Danaus plexippus KGM_02695 N
KGM_15498 Danaus plexippus KGM_15498 N
L798_05217 Zootermopsis nevadensis L798_05217 N
LCUP000435 Lucilia cuprina LCUP000435 N
LCUP008638 Lucilia cuprina LCUP008638 I
LDEC003104 Leptinotarsa decemlineata LDEC003104 N
LDEC010815 Leptinotarsa decemlineata LDEC010815 N
LDEC017550 Leptinotarsa decemlineata LDEC017550 N
LLOJ003747 Lutzomyia longipalpis LLOJ003747 N
LOAG_04396 Loa loa LOAG_04396 N
LOAG_12591 Loa loa LOAG_12591 N
LOAG_12746 Loa loa LOAG_12746 N
LotgiG176571 Lottia gigantea LotgiG176571 N
maker-nMf.1.1.scaf12105-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf12105-augustus-gene-0.3 N
MDOA013116 Musca domestica MDOA013116 N
MESCA003495 Megaselia scalaris MESCA003495 N
MhA1_Contig117.frz3.gene29 Meloidogyne hapla MhA1_Contig117.frz3.gene29 N
nAv.1.0.1.g04274 Acanthocheilonema viteae nAv.1.0.1.g04274 N
NBR_0000902501 Nippostrongylus brasiliensis NBR_0000902501 N
nDi.2.2.2.g06107 Dirofilaria immitis nDi.2.2.2.g06107 N
nDi.2.2.2.g08934 Dirofilaria immitis nDi.2.2.2.g08934 N
NECAME_12883 Necator americanus NECAME_12883 N
nLs.2.1.2.g03772 Litomosoides sigmodontis nLs.2.1.2.g03772 N
nLs.2.1.2.g07026 Litomosoides sigmodontis nLs.2.1.2.g07026 N
nOo.2.0.1.g05406 Onchocerca ochengi nOo.2.0.1.g05406 N
nOo.2.0.1.g09130 Onchocerca ochengi nOo.2.0.1.g09130 N
nRc.2.0.1.g29422 Romanomermis culicivorax nRc.2.0.1.g29422 N
Ocbimv22015178m.g Octopus bimaculoides Ocbimv22015178m.g N
Ocbimv22018978m.g Octopus bimaculoides Ocbimv22018978m.g N
OFLC_0000606701 Onchocerca flexuosa OFLC_0000606701 N
OFLC_0000825301 Onchocerca flexuosa OFLC_0000825301 N
OFLC_0001538801 Onchocerca flexuosa OFLC_0001538801 N
Ogr02070 Ophisaurus gracilis Ogr02070 N
Ogr11254 Ophisaurus gracilis Ogr11254 N
PEQ_0001376901 Parascaris equorum PEQ_0001376901 N
PHUM147980 Pediculus humanus PHUM147980 N
PHUM322720 Pediculus humanus PHUM322720 N
PPAI011117 Phlebotomus papatasi PPAI011117 N
PXEA_0001641201 Protopolystoma xenopodis PXEA_0001641201 N
PXEA_0002678801 Protopolystoma xenopodis PXEA_0002678801 N
PXEA_0002881901 Protopolystoma xenopodis PXEA_0002881901 N
RPRC001515 Rhodnius prolixus RPRC001515 N
RPRC001599 Rhodnius prolixus RPRC001599 N
RPRC009191 Rhodnius prolixus RPRC009191 N
SCUD_0000486401 Schistosoma curassoni SCUD_0000486401 N
SINV11021 Solenopsis invicta SINV11021 N
SINV17820 Solenopsis invicta SINV17820 I
Sjc_0021800 Schistosoma japonicum Sjc_0021800 N
Sjc_0063960 Schistosoma japonicum Sjc_0063960 N
SMTD_0000201501 Schistosoma mattheei SMTD_0000201501 N
SMTD_0000982301 Schistosoma mattheei SMTD_0000982301 N
SMUV_0000328201 Syphacia muris SMUV_0000328201 N
SNAPOd2T00004191001 Oikopleura dioica SNAPOd2T00004191001 N
SNAPOd2T00025690001 Oikopleura dioica SNAPOd2T00025690001 N
SPER_0000012201 Spirometra erinaceieuropaei SPER_0000012201 N
SPER_0000102601 Spirometra erinaceieuropaei SPER_0000102601 N
SPU_017169 Strongylocentrotus purpuratus SPU_017169 N
SPU_018391 Strongylocentrotus purpuratus SPU_018391 N
SROB_0000887301 Schistosoma rodhaini SROB_0000887301 N
SSLN_0001304401 Schistocephalus solidus SSLN_0001304401 N
SSLN_0001366501 Schistocephalus solidus SSLN_0001366501 N
SVE_1699100 Strongyloides venezuelensis SVE_1699100 N
SVUK_0001816001 Strongylus vulgaris SVUK_0001816001 N
TASK_0000235801 Taenia asiatica TASK_0000235801 N
TC013511 Tribolium castaneum TC013511 N
TCLT_0000604501 Thelazia callipaeda TCLT_0000604501 N
TCLT_0000808201 Thelazia callipaeda TCLT_0000808201 N
TCNE_0000688201 Toxocara canis TCNE_0000688201 N
TELCIR_17831 Teladorsagia circumcincta TELCIR_17831 N
TRE_0000996201 Trichobilharzia regenti TRE_0000996201 N
TsM_001062800 Taenia solium TsM_001062800 N
TTAC_0000422401 Hydatigera taeniaeformis TTAC_0000422401 N
TTAC_0001051901 Hydatigera taeniaeformis TTAC_0001051901 N
WUBG_02590 Wuchereria bancrofti WUBG_02590 N
WUBG_08214 Wuchereria bancrofti WUBG_08214 N
WUBG_09879 Wuchereria bancrofti WUBG_09879 N
YQE_06267 Dendroctonus ponderosae YQE_06267 N
YQE_06271 Dendroctonus ponderosae YQE_06271 N