POPTR_0015s13860 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0015s13860 T278482_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARR18
M02313_2.00 		Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN		 PBM
Weirauch et al.(2014)
pTH8840 		0.670 0.660
AT5G05090
M02305_2.00 		Arabidopsis thaliana
NHAGATHCKNN
NNMGDATCTDN		 PBM
Weirauch et al.(2014)
pTH7104 		0.665 0.638
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0015s13860.1 Myb 217 267

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30190.m011268 Ricinus communis 30190.m011268 I 0.000
AtMYB74 Arabidopsis lyrata Al_scaffold_0006_3584 I 0.000
AMTR_s00001p00105570 Amborella trichopoda AMTR_s00001p00105570 I 0.000
AMTR_s00036p00107460 Amborella trichopoda AMTR_s00036p00107460 I 0.000
Aquca_011_00538 Aquilegia coerulea Aquca_011_00538 I 0.000
Aquca_013_00221 Aquilegia coerulea Aquca_013_00221 I 0.000
Aquca_034_00423 Aquilegia coerulea Aquca_034_00423 I 0.000
AtMYB50 Arabidopsis thaliana AT1G57560 I 0.000
AtMYB103 Arabidopsis thaliana AT1G63910 I 0.000
MYB55 Arabidopsis thaliana AT4G01680 D 0.000
LAF1 Arabidopsis thaliana AT4G25560 I 0.000
AtMYB19 Arabidopsis thaliana AT5G52260 I 0.000
BGIOSGA007254 Oryza indica BGIOSGA007254 I 0.000
BGIOSGA008698 Oryza indica BGIOSGA008698 I 0.000
BGIOSGA014440 Oryza indica BGIOSGA014440 I 0.000
BGIOSGA027659 Oryza indica BGIOSGA027659 I 0.000
Bo1g017860 Brassica oleracea Bo1g017860 I 0.000
Bo3g023270 Brassica oleracea Bo3g023270 I 0.000
Bo7g105430 Brassica oleracea Bo7g105430 I 0.000
Bo8g077360 Brassica oleracea Bo8g077360 I 0.000
Bo9g004210 Brassica oleracea Bo9g004210 I 0.000
Bo9g029530 Brassica oleracea Bo9g029530 I 0.000
Bo9g033970 Brassica oleracea Bo9g033970 I 0.000
Bostr.18473s0062 Boechera stricta Bostr.18473s0062 I 0.000
Bostr.29223s0142 Boechera stricta Bostr.29223s0142 I 0.000
Bostr.30057s0004 Boechera stricta Bostr.30057s0004 I 0.000
Bostr.4825s0008 Boechera stricta Bostr.4825s0008 I 0.000
Bostr.7305s0041 Boechera stricta Bostr.7305s0041 I 0.000
Bostr.7867s0367 Boechera stricta Bostr.7867s0367 I 0.000
Bra012641 Brassica rapa Bra012641 I 0.000
Bra018027 Brassica rapa Bra018027 I 0.000
Bra027771 Brassica rapa Bra027771 I 0.000
Bra029129 Brassica rapa Bra029129 I 0.000
Bra036317 Brassica rapa Bra036317 I 0.000
Bra040181 Brassica rapa Bra040181 I 0.000
BRADI1G20250 Brachypodium distachyon BRADI1G20250 I 0.000
BRADI3G01377 Brachypodium distachyon BRADI3G01377 I 0.000
BRADI3G17165 Brachypodium distachyon BRADI3G17165 I 0.000
BRADI3G49970 Brachypodium distachyon BRADI3G49970 I 0.000
BRADI3G52260 Brachypodium distachyon BRADI3G52260 I 0.000
BRADI5G16672 Brachypodium distachyon BRADI5G16672 I 0.000
Cagra.0334s0011 Capsella grandiflora Cagra.0334s0011 I 0.000
Cagra.23907s0010 Capsella grandiflora Cagra.23907s0010 I 0.000
Cagra.6972s0001 Capsella grandiflora Cagra.6972s0001 I 0.000
Carubv10001308m.g Capsella rubella Carubv10001308m.g I 0.000
Carubv10007732m.g Capsella rubella Carubv10007732m.g I 0.000
Carubv10021858m.g Capsella rubella Carubv10021858m.g I 0.000
cassava12868.valid.m1 Manihot esculenta cassava12868.valid.m1 I 0.000
cassava17679.valid.m1 Manihot esculenta cassava17679.valid.m1 I 0.000
cassava21326.m1 Manihot esculenta cassava21326.m1 I 0.000
cassava26284.m1 Manihot esculenta cassava26284.m1 I 0.000
cassava30676.valid.m1 Manihot esculenta cassava30676.valid.m1 I 0.000
cassava33475.m1 Manihot esculenta cassava33475.m1 I 0.000
cassava39324.m1 Manihot esculenta cassava39324.m1 I 0.000
cassava5203.m1 Manihot esculenta cassava5203.m1 I 0.000
Ca_01072 Cicer arietinum Ca_01072 I 0.000
Ca_03589 Cicer arietinum Ca_03589 I 0.000
Ca_05777 Cicer arietinum Ca_05777 I 0.000
Ca_19758 Cicer arietinum Ca_19758 I 0.000
chr5.CM0148.380.nc Lotus japonicus chr5.CM0148.380.nc I 0.000
Ciclev10006897m.g Citrus clementina Ciclev10006897m.g N 0.000
Ciclev10015729m.g Citrus clementina Ciclev10015729m.g I 0.000
Ciclev10017658m.g Citrus clementina Ciclev10017658m.g I 0.000
Ciclev10021161m.g Citrus clementina Ciclev10021161m.g I 0.000
Cla001360 Citrullus lanatus Cla001360 I 0.000
Cla001724 Citrullus lanatus Cla001724 I 0.000
Cla003497 Citrullus lanatus Cla003497 I 0.000
Cla006288 Citrullus lanatus Cla006288 I 0.000
Cla008683 Citrullus lanatus Cla008683 I 0.000
Cla011601 Citrullus lanatus Cla011601 I 0.000
Cla017541 Citrullus lanatus Cla017541 I 0.000
Cucsa.045790 Cucumis sativus Cucsa.045790 I 0.000
Cucsa.065530 Cucumis sativus Cucsa.065530 I 0.000
Cucsa.195180 Cucumis sativus Cucsa.195180 I 0.000
Cucsa.303440 Cucumis sativus Cucsa.303440 I 0.000
Cucsa.313950 Cucumis sativus Cucsa.313950 I 0.000
Eucgr.B01827 Eucalyptus grandis Eucgr.B01827 I 0.000
Eucgr.D01819 Eucalyptus grandis Eucgr.D01819 I 0.000
Eucgr.E03689 Eucalyptus grandis Eucgr.E03689 I 0.000
Eucgr.E03819 Eucalyptus grandis Eucgr.E03819 I 0.000
Eucgr.K00250 Eucalyptus grandis Eucgr.K00250 I 0.000
Eucgr.K00251 Eucalyptus grandis Eucgr.K00251 N 0.000
evm.TU.supercontig_107.47 Carica papaya evm.TU.supercontig_107.47 I 0.000
evm.TU.supercontig_214.5 Carica papaya evm.TU.supercontig_214.5 I 0.000
evm.TU.supercontig_640.1 Carica papaya evm.TU.supercontig_640.1 I 0.000
evm.TU.supercontig_84.59 Carica papaya evm.TU.supercontig_84.59 I 0.000
F775_08647 Aegilops tauschii F775_08647 I 0.000
F775_16743 Aegilops tauschii F775_16743 I 0.000
F775_28951 Aegilops tauschii F775_28951 I 0.000
F775_52175 Aegilops tauschii F775_52175 N 0.000
AtMYB50 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1003728 I 0.000
AtMYB103 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000072 I 0.000
MYB55 Arabidopsis lyrata fgenesh2_kg.6__3543__AT4G01680.1 I 0.000
AtMYB19 Arabidopsis lyrata fgenesh2_kg.8__1111__AT5G52260.1 I 0.000
gene13281-v1.0-hybrid Fragaria vesca gene13281-v1.0-hybrid I 0.000
gene30725-v1.0-hybrid Fragaria vesca gene30725-v1.0-hybrid I 0.000
gene31835-v1.0-hybrid Fragaria vesca gene31835-v1.0-hybrid I 0.000
GLYMA01G43120 Glycine max GLYMA01G43120 I 0.000
GLYMA03G38660 Glycine max GLYMA03G38660 I 0.000
GLYMA07G30860 Glycine max GLYMA07G30860 I 0.000
GLYMA08G02080 Glycine max GLYMA08G02080 I 0.000
GLYMA08G06440 Glycine max GLYMA08G06440 I 0.000
GLYMA09G25655 Glycine max GLYMA09G25655 I 0.000
GLYMA10G28250 Glycine max GLYMA10G28250 I 0.000
GLYMA10G38110 Glycine max GLYMA10G38110 I 0.000
GLYMA11G02400 Glycine max GLYMA11G02400 I 0.000
GLYMA11G14200 Glycine max GLYMA11G14200 I 0.000
GLYMA12G06180 Glycine max GLYMA12G06180 I 0.000
GLYMA12G36630 Glycine max GLYMA12G36630 I 0.000
GLYMA13G27310 Glycine max GLYMA13G27310 I 0.000
GLYMA16G31280 Glycine max GLYMA16G31280 I 0.000
GLYMA19G41250 Glycine max GLYMA19G41250 I 0.000
GLYMA20G22230 Glycine max GLYMA20G22230 I 0.000
GLYMA20G29710 Glycine max GLYMA20G29710 I 0.000
Gorai.004G138300 Gossypium raimondii Gorai.004G138300 I 0.000
Gorai.007G011100 Gossypium raimondii Gorai.007G011100 I 0.000
Gorai.008G277900 Gossypium raimondii Gorai.008G277900 I 0.000
Gorai.009G174500 Gossypium raimondii Gorai.009G174500 I 0.000
GRMZM2G038722 Zea mays GRMZM2G038722 I 0.000
GRMZM2G088189 Zea mays GRMZM2G088189 I 0.000
GRMZM2G170049 Zea mays GRMZM2G170049 I 0.000
GRMZM2G325907 Zea mays GRMZM2G325907 I 0.000
GRMZM2G496770 Zea mays GRMZM2G496770 I 0.000
GSMUA_Achr10G08070_001 Musa acuminata GSMUA_Achr10G08070_001 I 0.000
GSMUA_Achr1G17480_001 Musa acuminata GSMUA_Achr1G17480_001 N 0.000
GSMUA_Achr4G29410_001 Musa acuminata GSMUA_Achr4G29410_001 I 0.000
GSMUA_Achr6G36930_001 Musa acuminata GSMUA_Achr6G36930_001 I 0.000
GSMUA_Achr8G11340_001 Musa acuminata GSMUA_Achr8G11340_001 I 0.000
LjSGA_115006.1 Lotus japonicus LjSGA_115006.1 I 0.000
LPERR02G00910 Leersia perrieri LPERR02G00910 I 0.000
LPERR02G23410 Leersia perrieri LPERR02G23410 I 0.000
LPERR04G16000 Leersia perrieri LPERR04G16000 I 0.000
LPERR08G03020 Leersia perrieri LPERR08G03020 I 0.000
Lus10002559.g Linum usitatissimum Lus10002559.g I 0.000
Lus10005739.g Linum usitatissimum Lus10005739.g I 0.000
Lus10005740.g Linum usitatissimum Lus10005740.g I 0.000
Lus10024669.g Linum usitatissimum Lus10024669.g I 0.000
Lus10027458.g Linum usitatissimum Lus10027458.g I 0.000
Lus10031281.g Linum usitatissimum Lus10031281.g I 0.000
Lus10032298.g Linum usitatissimum Lus10032298.g I 0.000
Lus10033473.g Linum usitatissimum Lus10033473.g I 0.000
Lus10038022.g Linum usitatissimum Lus10038022.g I 0.000
Lus10039213.g Linum usitatissimum Lus10039213.g I 0.000
MDP0000152575 Malus domestica MDP0000152575 I 0.000
MDP0000204495 Malus domestica MDP0000204495 I 0.000
MDP0000492221 Malus domestica MDP0000492221 I 0.000
MDP0000722954 Malus domestica MDP0000722954 I 0.000
MDP0000896053 Malus domestica MDP0000896053 I 0.000
mgf018114m Mimulus guttatus mgf018114m I 0.000
mgf024114m Mimulus guttatus mgf024114m I 0.000
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.000
MLOC_16981 Hordeum vulgare MLOC_16981 I 0.000
MLOC_58869 Hordeum vulgare MLOC_58869 I 0.000
MLOC_73614 Hordeum vulgare MLOC_73614 I 0.000
MTR_1g085040 Medicago truncatula MTR_1g085040 I 0.000
MTR_1g100667 Medicago truncatula MTR_1g100667 I 0.000
MTR_4g065017 Medicago truncatula MTR_4g065017 I 0.000
MTR_5g010020 Medicago truncatula MTR_5g010020 I 0.000
MTR_6g055910 Medicago truncatula MTR_6g055910 I 0.000
MTR_7g111290 Medicago truncatula MTR_7g111290 I 0.000
MTR_8g098860 Medicago truncatula MTR_8g098860 I 0.000
OB02G10930 Oryza brachyantha OB02G10930 I 0.000
OB02G32950 Oryza brachyantha OB02G32950 I 0.000
OB02G35920 Oryza brachyantha OB02G35920 I 0.000
OB04G26810 Oryza brachyantha OB04G26810 I 0.000
OB08G13090 Oryza brachyantha OB08G13090 I 0.000
OBART02G25570 Oryza barthii OBART02G25570 I 0.000
OBART04G23680 Oryza barthii OBART04G23680 I 0.000
OBART08G03020 Oryza barthii OBART08G03020 I 0.000
OGLUM02G26100 Oryza glumaepatula OGLUM02G26100 I 0.000
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I 0.000
OGLUM08G03030 Oryza glumaepatula OGLUM08G03030 I 0.000
OMERI02G25080 Oryza meridionalis OMERI02G25080 I 0.000
OMERI04G19570 Oryza meridionalis OMERI04G19570 I 0.000
OMERI08G02950 Oryza meridionalis OMERI08G02950 I 0.000
ONIVA02G28010 Oryza nivara ONIVA02G28010 I 0.000
ONIVA04G19740 Oryza nivara ONIVA04G19740 I 0.000
ONIVA06G02400 Oryza nivara ONIVA06G02400 I 0.000
OPUNC02G00570 Oryza punctata OPUNC02G00570 I 0.000
OPUNC02G23410 Oryza punctata OPUNC02G23410 I 0.000
OPUNC02G26430 Oryza punctata OPUNC02G26430 I 0.000
OPUNC04G21230 Oryza punctata OPUNC04G21230 I 0.000
OPUNC08G02760 Oryza punctata OPUNC08G02760 I 0.000
orange1.1g014135m.g Citrus sinensis orange1.1g014135m.g I 0.000
orange1.1g018154m.g Citrus sinensis orange1.1g018154m.g I 0.000
orange1.1g020613m.g Citrus sinensis orange1.1g020613m.g I 0.000
orange1.1g021164m.g Citrus sinensis orange1.1g021164m.g I 0.000
orange1.1g045400m.g Citrus sinensis orange1.1g045400m.g I 0.000
ORGLA02G0010000 Oryza glaberrima ORGLA02G0010000 I 0.000
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I 0.000
ORGLA08G0023900 Oryza glaberrima ORGLA08G0023900 I 0.000
ORUFI02G01120 Oryza rufipogon ORUFI02G01120 I 0.000
ORUFI02G26980 Oryza rufipogon ORUFI02G26980 I 0.000
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I 0.000
ORUFI08G03380 Oryza rufipogon ORUFI08G03380 I 0.000
OS04G0594100 Oryza sativa OS04G0594100 I 0.000
OS08G0151300 Oryza sativa OS08G0151300 I 0.000
Pavir.Aa03518 Panicum virgatum Pavir.Aa03518 I 0.000
Pavir.Ab02417 Panicum virgatum Pavir.Ab02417 I 0.000
Pavir.Fb00364 Panicum virgatum Pavir.Fb00364 I 0.000
Pavir.J24194 Panicum virgatum Pavir.J24194 I 0.000
Pavir.J29561 Panicum virgatum Pavir.J29561 I 0.000
PDK_20s1606731g001 Phoenix dactylifera PDK_20s1606731g001 I 0.000
PDK_20s1854611g001 Phoenix dactylifera PDK_20s1854611g001 I 0.000
PGSC0003DMG400014291 Solanum tuberosum PGSC0003DMG400014291 I 0.000
PGSC0003DMG400022399 Solanum tuberosum PGSC0003DMG400022399 I 0.000
PK02515.1 Cannabis sativa PK02515.1 I 0.000
PK13930.1 Cannabis sativa PK13930.1 I 0.000
PK18276.1 Cannabis sativa PK18276.1 I 0.000
Pm009892 Prunus mume Pm009892 I 0.000
Pm019344 Prunus mume Pm019344 I 0.000
Pm023937 Prunus mume Pm023937 I 0.000
POPTR_0001s09810 Populus trichocarpa POPTR_0001s09810 I 0.000
POPTR_0001s26590 Populus trichocarpa POPTR_0001s26590 I 0.000
POPTR_0003s13190 Populus trichocarpa POPTR_0003s13190 I 0.000
POPTR_0004s03310 Populus trichocarpa POPTR_0004s03310 I 0.000
POPTR_0009s05860 Populus trichocarpa POPTR_0009s05860 I 0.000
POPTR_0011s04120 Populus trichocarpa POPTR_0011s04120 I 0.000
POPTR_0012s13240 Populus trichocarpa POPTR_0012s13240 I 0.000
POPTR_0012s13260 Populus trichocarpa POPTR_0012s13260 I 0.000
POPTR_0013s00290 Populus trichocarpa POPTR_0013s00290 I 0.000
POPTR_0015s13190 Populus trichocarpa POPTR_0015s13190 I 0.000
PRUPE_ppa009566mg Prunus persica PRUPE_ppa009566mg I 0.000
PRUPE_ppa019529mg Prunus persica PRUPE_ppa019529mg I 0.000
PRUPE_ppa019729mg Prunus persica PRUPE_ppa019729mg I 0.000
SapurV1A.0028s0230 Salix purpurea SapurV1A.0028s0230 I 0.000
SapurV1A.0098s0320 Salix purpurea SapurV1A.0098s0320 I 0.000
SapurV1A.0119s0140 Salix purpurea SapurV1A.0119s0140 I 0.000
SapurV1A.0442s0250 Salix purpurea SapurV1A.0442s0250 I 0.000
SapurV1A.0534s0230 Salix purpurea SapurV1A.0534s0230 I 0.000
SapurV1A.0754s0180 Salix purpurea SapurV1A.0754s0180 I 0.000
SapurV1A.0925s0070 Salix purpurea SapurV1A.0925s0070 I 0.000
SapurV1A.1088s0050 Salix purpurea SapurV1A.1088s0050 I 0.000
SapurV1A.1253s0080 Salix purpurea SapurV1A.1253s0080 I 0.000
SapurV1A.1253s0100 Salix purpurea SapurV1A.1253s0100 I 0.000
SapurV1A.3561s0010 Salix purpurea SapurV1A.3561s0010 I 0.000
Sb04g001110 Sorghum bicolor Sb04g001110 I 0.000
Sb04g031110 Sorghum bicolor Sb04g031110 I 0.000
Sb04g033680 Sorghum bicolor Sb04g033680 I 0.000
Sb06g023610 Sorghum bicolor Sb06g023610 I 0.000
Sb07g003320 Sorghum bicolor Sb07g003320 I 0.000
Sb09g003100 Sorghum bicolor Sb09g003100 I 0.000
SELMODRAFT_437219 Selaginella moellendorffii SELMODRAFT_437219 I 0.000
Si010384m.g Setaria italica Si010384m.g I 0.000
Si017899m.g Setaria italica Si017899m.g I 0.000
Si017947m.g Setaria italica Si017947m.g I 0.000
Solyc02g079280.2 Solanum lycopersicum Solyc02g079280.2 I 0.000
Solyc03g025870.2 Solanum lycopersicum Solyc03g025870.2 I 0.000
Solyc08g081500.1 Solanum lycopersicum Solyc08g081500.1 I 0.000
TCM_015157 Theobroma cacao TCM_015157 I 0.000
TCM_016332 Theobroma cacao TCM_016332 I 0.000
TCM_026853 Theobroma cacao TCM_026853 I 0.000
TCM_030009 Theobroma cacao TCM_030009 I 0.000
Thhalv10010657m.g Eutrema salsugineum Thhalv10010657m.g I 0.000
Thhalv10014388m.g Eutrema salsugineum Thhalv10014388m.g I 0.000
Thhalv10023601m.g Eutrema salsugineum Thhalv10023601m.g I 0.000
Thhalv10023948m.g Eutrema salsugineum Thhalv10023948m.g I 0.000
Thhalv10028778m.g Eutrema salsugineum Thhalv10028778m.g I 0.000
Thhalv10029512m.g Eutrema salsugineum Thhalv10029512m.g I 0.000
Traes_2AL_2D4100475 Triticum aestivum Traes_2AL_2D4100475 I 0.000
Traes_2AL_962A9D448 Triticum aestivum Traes_2AL_962A9D448 I 0.000
Traes_2BL_03F3475CD Triticum aestivum Traes_2BL_03F3475CD I 0.000
Traes_2BL_35241DE8D Triticum aestivum Traes_2BL_35241DE8D I 0.000
Traes_2BL_604FE7639 Triticum aestivum Traes_2BL_604FE7639 I 0.000
Traes_2BL_7CEC6A8D7 Triticum aestivum Traes_2BL_7CEC6A8D7 I 0.000
Traes_6AL_D10CBA40D Triticum aestivum Traes_6AL_D10CBA40D I 0.000
Traes_6AS_7C1FD879C Triticum aestivum Traes_6AS_7C1FD879C I 0.000
Traes_6BL_CE61B9510 Triticum aestivum Traes_6BL_CE61B9510 I 0.000
Traes_6BS_B2C9F123A Triticum aestivum Traes_6BS_B2C9F123A I 0.000
Traes_6DL_A014E9069 Triticum aestivum Traes_6DL_A014E9069 I 0.000
Traes_6DS_8F05AE571 Triticum aestivum Traes_6DS_8F05AE571 I 0.000
Traes_7AL_04D939077 Triticum aestivum Traes_7AL_04D939077 I 0.000
Traes_7DL_5BD0D4BD1 Triticum aestivum Traes_7DL_5BD0D4BD1 I 0.000
TRIUR3_11495 Triticum urartu TRIUR3_11495 I 0.000
TRIUR3_15020 Triticum urartu TRIUR3_15020 I 0.000
TRIUR3_24104 Triticum urartu TRIUR3_24104 I 0.000
TRIUR3_32691 Triticum urartu TRIUR3_32691 I 0.000
VIT_00s0203g00070 Vitis vinifera VIT_00s0203g00070 I 0.000
AtMYB103 Vitis vinifera VIT_02s0025g00320 I 0.000
VIT_06s0004g02110 Vitis vinifera VIT_06s0004g02110 I 0.000
VIT_16s0050g00050 Vitis vinifera VIT_16s0050g00050 I 0.000