29788.m000340 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 29788.m000340 T283789_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB59
M00883_2.00 		Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN		 PBM
Franco-Zorrilla et al.(2014)
MYB59 		0.897 0.957
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.662 0.677
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.662 0.677
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29788.m000340 Myb 10 57
29788.m000340 Myb 63 108

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

301 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF274 Bos taurus ENSBTAG00000013353 I
ZNF544 Callithrix jacchus ENSCJAG00000000329 I
ENSCSAG00000019664 Chlorocebus sabaeus ENSCSAG00000019664 I
ZNF274 Dasypus novemcinctus ENSDNOG00000032910 I
ZNF274 Equus caballus ENSECAG00000007526 I
ZNF274 Erinaceus europaeus ENSEEUG00000008228 I
ZNF274 Homo sapiens ENSG00000171606 D
ZNF274 Gorilla gorilla ENSGGOG00000004688 I
ZNF274 Microcebus murinus ENSMICG00000017855 I
ZNF274 Macaca mulatta ENSMMUG00000020505 I
Zfp110 Mus musculus ENSMUSG00000058638 I
ENSNLEG00000011103 Nomascus leucogenys ENSNLEG00000011103 I
ZNF274 Otolemur garnettii ENSOGAG00000005637 I
ZNF274 Ochotona princeps ENSOPRG00000007383 I
ENSP00000409872 Macaca fascicularis ENSP00000409872 I
ENSPANG00000012245 Papio anubis ENSPANG00000012245 I
ENSPPYG00000010493 Pongo abelii ENSPPYG00000010493 I
ZNF274 Pan troglodytes ENSPTRG00000011583 I
ZNF274 Pteropus vampyrus ENSPVAG00000002938 I
Zfp110 Rattus norvegicus ENSRNOG00000031328 I
ZNF274 Sorex araneus ENSSARG00000001423 I
ZNF274 Sus scrofa ENSSSCG00000003998 I
ZNF274 Tupaia belangeri ENSTBEG00000006394 I
ENSTSYG00000010913 Tarsius syrichta ENSTSYG00000010913 I
ZNF274 Tursiops truncatus ENSTTRG00000013077 I
Myotis_brandtii_ZNF274_10003422 Myotis brandtii Myotis_brandtii_ZNF274_10003422 I