30131.m007263 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 30131.m007263 T283877_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SRM1
M02307_2.00 		Arabidopsis thaliana
NNHNATCNN
NNGATNDNN		 PBM
Weirauch et al.(2014)
pTH7080 		0.749 0.848
SRM1
M07121_2.00 		Arabidopsis thaliana
YCTTATCYWHW
WDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_colamp_a 		0.749 0.848
SRM1
M07122_2.00 		Arabidopsis thaliana
YCTTATCYWHWWH
DWWDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_col_b 		0.749 0.848
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30131.m007263 Myb 121 166

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R005479 Calypte anna Aan_R005479 N 0.000
ACEP25970 Atta cephalotes ACEP25970 N 0.000
ACOM023832 Anopheles coluzzii ACOM023832 N 0.000
ACRE_008210 Acremonium chrysogenum ACRE_008210 N 0.000
ANCCAN_16550 Ancylostoma caninum ANCCAN_16550 N 0.000
BOTBODRAFT_174219 Botryobasidium botryosum BOTBODRAFT_174219 N 0.000
BOTBODRAFT_182015 Botryobasidium botryosum BOTBODRAFT_182015 N 0.000
Bra015737 Brassica rapa Bra015737 N 0.000
CapteG108943 Capitella teleta CapteG108943 N 0.000
cassava32082.m1 Manihot esculenta cassava32082.m1 N 0.000
cassava33852.m1 Manihot esculenta cassava33852.m1 N 0.000
Cflo_11029--XP_001120115.1_APIME Camponotus floridanus Cflo_11029--XP_001120115.1_APIME N 0.000
ENSCJAG00000034027 Callithrix jacchus ENSCJAG00000034027 N 0.000
ENSCSAVG00000005880 Ciona savignyi ENSCSAVG00000005880 N 0.000
ARID5A Microcebus murinus ENSMICG00000001964 I 0.000
ENSOARG00000013883 Ovis aries ENSOARG00000013883 N 0.000
ARID5A Sorex araneus ENSSARG00000003004 I 0.000
ARID5B Tursiops truncatus ENSTTRG00000009968 N 0.000
evm.TU.supercontig_70.18 Carica papaya evm.TU.supercontig_70.18 N 0.000
e_gw1.8.356.1 Monosiga brevicollis e_gw1.8.356.1 N 0.000
F775_22367 Aegilops tauschii F775_22367 N 0.000
GL12242 Drosophila persimilis FBgn0149849 N 0.000
GD20218 Drosophila simulans FBgn0191696 N 0.000
GK21672 Drosophila willistoni FBgn0223657 N 0.000
gene11760-v1.0-hybrid Fragaria vesca gene11760-v1.0-hybrid N 0.000
Genemark.397_g Heterobasidion annosum Genemark.397_g N 0.000
Genemark1.2983_g Coccomyxa subellipsoidea C169 Genemark1.2983_g N 0.000
Gfo_R015467 Geospiza fortis Gfo_R015467 N 0.000
GG.C169_S05_00378 Chlorella vulgaris GG.C169_S05_00378 N 0.000
gw1.8.90.1 Volvox carteri gw1.8.90.1 N 0.000
HCOI00647600 Haemonchus contortus HCOI00647600 N 0.000
HHAL003716-PA Halyomorpha halys HHAL003716-PA N 0.000
HPBE_0000220801 Heligmosomoides bakeri HPBE_0000220801 N 0.000
Hsal_11763--XP_001120115.1_APIME Harpegnathos saltator Hsal_11763--XP_001120115.1_APIME N 0.000
MCINX010724 Melitaea cinxia MCINX010724 N 0.000
MESCA003685 Megaselia scalaris MESCA003685 N 0.000
MLOC_7381 Hordeum vulgare MLOC_7381 N 0.000
OESDEN_17751 Oesophagostomum dentatum OESDEN_17751 N 0.000
orange1.1g009744m.g Citrus sinensis orange1.1g009744m.g I 0.000
ORGLA07G0233500 Oryza glaberrima ORGLA07G0233500 N 0.000
OS06G0622300 Oryza sativa OS06G0622300 I 0.000
Pavir.J25952 Panicum virgatum Pavir.J25952 N 0.000
PDK_20s1315202g001 Phoenix dactylifera PDK_20s1315202g001 N 0.000
PGSC0003DMG400047019 Solanum tuberosum PGSC0003DMG400047019 N 0.000
PGSC0003DMG401018896 Solanum tuberosum PGSC0003DMG401018896 N 0.000
PHUM027610 Pediculus humanus PHUM027610 N 0.000
SBAD_0000429301 Soboliphyme baturini SBAD_0000429301 N 0.000
Sjc_0111140 Schistosoma japonicum Sjc_0111140 N 0.000
SMTD_0000131801 Schistosoma mattheei SMTD_0000131801 N 0.000
SMTD_0001549501 Schistosoma mattheei SMTD_0001549501 N 0.000
Solyc12g038740.1 Solanum lycopersicum Solyc12g038740.1 N 0.000
SPER_0000246801 Spirometra erinaceieuropaei SPER_0000246801 N 0.000
SPER_0003392901 Spirometra erinaceieuropaei SPER_0003392901 N 0.000
SPER_0003827801 Spirometra erinaceieuropaei SPER_0003827801 N 0.000
SPU_003500 Strongylocentrotus purpuratus SPU_003500 N 0.000
SROB_0001561301 Schistosoma rodhaini SROB_0001561301 N 0.000
SVUK_0000804601 Strongylus vulgaris SVUK_0000804601 N 0.000
TELCIR_22728 Teladorsagia circumcincta TELCIR_22728 N 0.000
TRE_0000846701 Trichobilharzia regenti TRE_0000846701 N 0.000
TRIUR3_29596 Triticum urartu TRIUR3_29596 N 0.000
YQE_11989 Dendroctonus ponderosae YQE_11989 N 0.000