30169.m006322 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 30169.m006322 T283898_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtMYB10
M07081_2.00 		Arabidopsis thaliana
YYYACCWAMCHHHHNH
DNDDDDGKTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB10_col_a 		0.803 0.806
AtMYB10
M07082_2.00 		Arabidopsis thaliana
NYYYACCWAMCHHH
DDDGKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB10_colamp_a 		0.803 0.806
MYB58
M07005_2.00 		Arabidopsis thaliana
NNYYYACCWAMCHHH
DDDGKTWGGTRRRNN		 Dap-seq
OMalley et al.(2016)
MYB58_col_a 		0.789 0.839
MYB58
M07006_2.00 		Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH
DNNNNDDDGKTWGGTRDRNND		 Dap-seq
OMalley et al.(2016)
MYB58_colamp_a 		0.789 0.839
MYB15
M07084_2.00 		Arabidopsis thaliana
NNNHNNHHNHHYCACCWAMYH
DRKTWGGTGRDDNDDNNDNNN		 Dap-seq
OMalley et al.(2016)
ATY19_col_a 		0.726 0.796
MYB15
M02699_2.00 		Arabidopsis thaliana
CCACCTACCSBBG
CVVSGGTAGGTGG		 SELEX
Mathelier et al.(2014)
MA0574.1 		0.726 0.796
MYB15
M11041_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_01 		0.726 0.796
MYB15
M11042_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_Q2 		0.726 0.796
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.711 0.796
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.711 0.796
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.709 0.785
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.709 0.785
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.676 0.731
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.669 0.720
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.669 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30169.m006322 Myb 16 63
30169.m006322 Myb 69 114

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

602 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29738.m001046 Ricinus communis 29738.m001046 I
29917.m002016 Ricinus communis 29917.m002016 I
anac044 Arabidopsis lyrata Al_scaffold_0003_51 N
AMTR_s00060p00054700 Amborella trichopoda AMTR_s00060p00054700 I
Aquca_002_01098 Aquilegia coerulea Aquca_002_01098 I
Aquca_054_00006 Aquilegia coerulea Aquca_054_00006 I
NAC010 Arabidopsis thaliana AT1G28470 D
anac044 Arabidopsis thaliana AT3G01600 N
anac085 Arabidopsis thaliana AT5G14490 I
BGIOSGA006133 Oryza indica BGIOSGA006133 N
Bo5g055990 Brassica oleracea Bo5g055990 I
Bostr.1460s0050 Boechera stricta Bostr.1460s0050 N
Bostr.2902s0186 Boechera stricta Bostr.2902s0186 I
Bostr.7867s0691 Boechera stricta Bostr.7867s0691 I
Bra001000 Brassica rapa Bra001000 N
Bra006257 Brassica rapa Bra006257 I
Bra032910 Brassica rapa Bra032910 I
BRADI1G43840 Brachypodium distachyon BRADI1G43840 I
BRADI3G47627 Brachypodium distachyon BRADI3G47627 I
Cagra.1561s0026 Capsella grandiflora Cagra.1561s0026 N
Cagra.1822s0012 Capsella grandiflora Cagra.1822s0012 I
Cagra.3166s0054 Capsella grandiflora Cagra.3166s0054 I
Carubv10002665m.g Capsella rubella Carubv10002665m.g I
Carubv10009638m.g Capsella rubella Carubv10009638m.g I
Carubv10014004m.g Capsella rubella Carubv10014004m.g N
cassava12330.valid.m1 Manihot esculenta cassava12330.valid.m1 I
cassava14633.m1 Manihot esculenta cassava14633.m1 I
cassava3690.m1 Manihot esculenta cassava3690.m1 I
Ca_23230 Cicer arietinum Ca_23230 N
chr1.CM0001.370.nd Lotus japonicus chr1.CM0001.370.nd N
chr2.CM0749.410.nc Lotus japonicus chr2.CM0749.410.nc I
chr3.CM0160.860.nd Lotus japonicus chr3.CM0160.860.nd I
chr6.LjT04E21.30.nc Lotus japonicus chr6.LjT04E21.30.nc I
Ciclev10015507m.g Citrus clementina Ciclev10015507m.g I
Ciclev10015976m.g Citrus clementina Ciclev10015976m.g I
Cla004701 Citrullus lanatus Cla004701 I
Cla020673 Citrullus lanatus Cla020673 I
Cucsa.011210 Cucumis sativus Cucsa.011210 I
Cucsa.046530 Cucumis sativus Cucsa.046530 I
Cucsa.126960 Cucumis sativus Cucsa.126960 I
Cucsa.283900 Cucumis sativus Cucsa.283900 I
Eucgr.D00591 Eucalyptus grandis Eucgr.D00591 I
Eucgr.D00592 Eucalyptus grandis Eucgr.D00592 I
Eucgr.D00594 Eucalyptus grandis Eucgr.D00594 I
Eucgr.E03226 Eucalyptus grandis Eucgr.E03226 I
Eucgr.G02349 Eucalyptus grandis Eucgr.G02349 I
Eucgr.J02254 Eucalyptus grandis Eucgr.J02254 I
F775_30638 Aegilops tauschii F775_30638 I
gene03875-v1.0-hybrid Fragaria vesca gene03875-v1.0-hybrid I
gene27940-v1.0-hybrid Fragaria vesca gene27940-v1.0-hybrid I
GLYMA01G22510 Glycine max GLYMA01G22510 I
GLYMA02G11140 Glycine max GLYMA02G11140 I
GLYMA05G09110 Glycine max GLYMA05G09110 I
GLYMA07G32250 Glycine max GLYMA07G32250 I
GLYMA12G13710 Glycine max GLYMA12G13710 I
GLYMA13G24320 Glycine max GLYMA13G24320 I
GLYMA13G30800 Glycine max GLYMA13G30800 I
GLYMA15G08480 Glycine max GLYMA15G08480 I
GLYMA16G07501 Glycine max GLYMA16G07501 N
GLYMA19G00640 Glycine max GLYMA19G00640 N
GLYMA19G08510 Glycine max GLYMA19G08510 N
GLYMA20G32690 Glycine max GLYMA20G32690 I
Gorai.006G034600 Gossypium raimondii Gorai.006G034600 I
Gorai.007G075300 Gossypium raimondii Gorai.007G075300 I
Gorai.008G186300 Gossypium raimondii Gorai.008G186300 I
Gorai.010G157600 Gossypium raimondii Gorai.010G157600 I
GRMZM2G038073 Zea mays GRMZM2G038073 N
GRMZM2G104078 Zea mays GRMZM2G104078 N
GSMUA_Achr3G07330_001 Musa acuminata GSMUA_Achr3G07330_001 I
GSMUA_Achr9G01880_001 Musa acuminata GSMUA_Achr9G01880_001 I
GSMUA_AchrUn_randomG17050_001 Musa acuminata GSMUA_AchrUn_randomG17050_001 I
LPERR02G18380 Leersia perrieri LPERR02G18380 N
Lus10003668.g Linum usitatissimum Lus10003668.g N
Lus10021708.g Linum usitatissimum Lus10021708.g I
MDP0000276278 Malus domestica MDP0000276278 I
MDP0000283975 Malus domestica MDP0000283975 N
MDP0000309351 Malus domestica MDP0000309351 I
MDP0000663564 Malus domestica MDP0000663564 I
mgf012882m Mimulus guttatus mgf012882m I
mgf018486m Mimulus guttatus mgf018486m I
MTR_1g093670 Medicago truncatula MTR_1g093670 I
MTR_1g093680 Medicago truncatula MTR_1g093680 I
MTR_2g014680 Medicago truncatula MTR_2g014680 I
MTR_4g078875 Medicago truncatula MTR_4g078875 I
MTR_4g088245 Medicago truncatula MTR_4g088245 I
MTR_5g053430 Medicago truncatula MTR_5g053430 I
MTR_8g069160 Medicago truncatula MTR_8g069160 I
OB02G30060 Oryza brachyantha OB02G30060 N
OB06G19430 Oryza brachyantha OB06G19430 I
OBART02G22660 Oryza barthii OBART02G22660 N
OGLUM02G22980 Oryza glumaepatula OGLUM02G22980 N
OLONG_021848 Oryza longistaminata OLONG_021848 N
OMERI02G22200 Oryza meridionalis OMERI02G22200 N
ONIVA02G25300 Oryza nivara ONIVA02G25300 N
OPUNC02G20570 Oryza punctata OPUNC02G20570 N
ORGLA02G0193300 Oryza glaberrima ORGLA02G0193300 N
ORUFI02G23890 Oryza rufipogon ORUFI02G23890 N
OS02G0594800 Oryza sativa OS02G0594800 N
Pavir.Ab02919 Panicum virgatum Pavir.Ab02919 I
Pavir.Da01643 Panicum virgatum Pavir.Da01643 I
Pavir.Db01100 Panicum virgatum Pavir.Db01100 I
PDK_20s1381351g001 Phoenix dactylifera PDK_20s1381351g001 I
PGSC0003DMG400000809 Solanum tuberosum PGSC0003DMG400000809 I
PGSC0003DMG400012607 Solanum tuberosum PGSC0003DMG400012607 I
PK17141.1 Cannabis sativa PK17141.1 I
PK25812.1 Cannabis sativa PK25812.1 I
Pm010104 Prunus mume Pm010104 I
Pm015625 Prunus mume Pm015625 I
Pm029010 Prunus mume Pm029010 I
POPTR_0001s35490 Populus trichocarpa POPTR_0001s35490 I
POPTR_0008s11550 Populus trichocarpa POPTR_0008s11550 I
POPTR_0010s13980 Populus trichocarpa POPTR_0010s13980 I
PRUPE_ppa006948mg Prunus persica PRUPE_ppa006948mg I
PRUPE_ppa008828mg Prunus persica PRUPE_ppa008828mg I
SapurV1A.0079s0500 Salix purpurea SapurV1A.0079s0500 I
SapurV1A.0304s0050 Salix purpurea SapurV1A.0304s0050 I
SapurV1A.0716s0010 Salix purpurea SapurV1A.0716s0010 I
SapurV1A.1388s0020 Salix purpurea SapurV1A.1388s0020 I
SapurV1A.2846s0020 Salix purpurea SapurV1A.2846s0020 I
Sb04g024780 Sorghum bicolor Sb04g024780 N
ANAC010 Arabidopsis lyrata scaffold_103183.1 I
Si006639m.g Setaria italica Si006639m.g I
Si012740m.g Setaria italica Si012740m.g N
Si017393m.g Setaria italica Si017393m.g I
Solyc02g093420.2 Solanum lycopersicum Solyc02g093420.2 I
TCM_011869 Theobroma cacao TCM_011869 I
TCM_016984 Theobroma cacao TCM_016984 I
TCM_029798 Theobroma cacao TCM_029798 I
Thhalv10008249m.g Eutrema salsugineum Thhalv10008249m.g I
Thhalv10022099m.g Eutrema salsugineum Thhalv10022099m.g N
Traes_6AL_C14335DC8 Triticum aestivum Traes_6AL_C14335DC8 I
Traes_6BL_B27806C89 Triticum aestivum Traes_6BL_B27806C89 I
Traes_6DL_2F3586557 Triticum aestivum Traes_6DL_2F3586557 I
Traes_7AS_6E6A5CD04 Triticum aestivum Traes_7AS_6E6A5CD04 I
Traes_7BS_99BF8BA2F Triticum aestivum Traes_7BS_99BF8BA2F I
Traes_7DS_78B5508C0 Triticum aestivum Traes_7DS_78B5508C0 I
TRIUR3_21992 Triticum urartu TRIUR3_21992 I
SOG1 Vitis vinifera VIT_01s0011g02990 I
VIT_14s0066g00360 Vitis vinifera VIT_14s0066g00360 I