cassava13649.valid.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava13649.valid.m1 T284007_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASR3
M07053_2.00 		Arabidopsis thaliana
DNNNNHHWNDRCCCTWAW
WTWAGGGYHNWDDNNNNH		 Dap-seq
OMalley et al.(2016)
AT2G33550_col_a 		0.909 0.978
ASR3
M07054_2.00 		Arabidopsis thaliana
NHWDDTRCCCTWMW
WKWAGGGYAHHWDN		 Dap-seq
OMalley et al.(2016)
AT2G33550_colamp_a 		0.909 0.978
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava13649.valid.m1 Myb 42 109

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
14441_Multiple Saccharomyces mikatae 14441_Multiple I
14775_YLR014C Saccharomyces paradoxus 14775_YLR014C I
KAFR_0J00690 Kazachstania africana KAFR_0J00690 I
LALA0_S04e07426g Lachancea lanzarotensis LALA0_S04e07426g I
NCAS_0D02540 Naumovozyma castellii NCAS_0D02540 I
NDAI_0I02350 Naumovozyma dairenensis NDAI_0I02350 I
Scas_Contig521.2 Saccharomyces castellii Scas_Contig521.2 I
SKUD_202511 Saccharomyces kudriavzevii SKUD_202511 I
TDEL_0E03910 Torulaspora delbrueckii TDEL_0E03910 I
PPR1 Saccharomyces cerevisiae YLR014C D