Cucsa.313480 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.313480 T284518_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
APRR2
M02300_2.00 		Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN		 PBM
Weirauch et al.(2014)
pTH7102 		0.714 0.851
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.313480.1 Myb 287 337
Cucsa.313480.2 Myb 280 330

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30054.m000786 Ricinus communis 30054.m000786 I 0.707
AMTR_s00149p00035260 Amborella trichopoda AMTR_s00149p00035260 I 0.840
Aquca_044_00072 Aquilegia coerulea Aquca_044_00072 I 0.724
APRR2 Arabidopsis thaliana AT4G18020 D 0.714
BGIOSGA002040 Oryza indica BGIOSGA002040 I 0.681
BGIOSGA022875 Oryza indica BGIOSGA022875 I 0.696
Bo1g019180 Brassica oleracea Bo1g019180 I 0.691
Bo7g105690 Brassica oleracea Bo7g105690 I 0.691
Bostr.30275s0270 Boechera stricta Bostr.30275s0270 I 0.691
Bra012623 Brassica rapa Bra012623 I 0.691
Bra013277 Brassica rapa Bra013277 I 0.691
Bra013278 Brassica rapa Bra013278 I 0.691
Bra013279 Brassica rapa Bra013279 I 0.691
Bra036015 Brassica rapa Bra036015 I 0.724
BRADI1G43710 Brachypodium distachyon BRADI1G43710 I 0.696
BRADI2G08287 Brachypodium distachyon BRADI2G08287 I 0.714
Cagra.1595s0002 Capsella grandiflora Cagra.1595s0002 I 0.803
Carubv10004540m.g Capsella rubella Carubv10004540m.g I 0.803
cassava2466.valid.m1 Manihot esculenta cassava2466.valid.m1 I 0.680
cassava42047.valid.m1 Manihot esculenta cassava42047.valid.m1 I 0.795
cassava42048.valid.m1 Manihot esculenta cassava42048.valid.m1 I 0.795
Ca_02285 Cicer arietinum Ca_02285 I 0.821
Ca_12825 Cicer arietinum Ca_12825 I 0.813
Ca_24009 Cicer arietinum Ca_24009 I 0.754
chr2.CM0021.770.nc Lotus japonicus chr2.CM0021.770.nc I 0.803
chr4.CM0831.100.nd Lotus japonicus chr4.CM0831.100.nd I 0.813
Ciclev10031120m.g Citrus clementina Ciclev10031120m.g I 0.732
Cla008926 Citrullus lanatus Cla008926 I 0.735
Cla016403 Citrullus lanatus Cla016403 I 0.766
Cucsa.321580 Cucumis sativus Cucsa.321580 I 0.735
Eucgr.E00308 Eucalyptus grandis Eucgr.E00308 I 0.724
evm.TU.supercontig_6.428 Carica papaya evm.TU.supercontig_6.428 I 0.672
F775_20285 Aegilops tauschii F775_20285 I 0.696
APRR2 Arabidopsis lyrata fgenesh2_kg.7__2503__AT4G18020.2 I 0.714
gene10484-v1.0-hybrid Fragaria vesca gene10484-v1.0-hybrid I 0.732
GLYMA01G40900 Glycine max GLYMA01G40900 I 0.803
GLYMA05G06070 Glycine max GLYMA05G06070 I 0.821
GLYMA11G04441 Glycine max GLYMA11G04441 I 0.803
GLYMA17G16360 Glycine max GLYMA17G16360 I 0.810
Gorai.003G180100 Gossypium raimondii Gorai.003G180100 I 0.782
Gorai.004G188300 Gossypium raimondii Gorai.004G188300 I 0.787
Gorai.008G228800 Gossypium raimondii Gorai.008G228800 I 0.821
GRMZM2G087804 Zea mays GRMZM2G087804 I 0.696
GSMUA_Achr10G26160_001 Musa acuminata GSMUA_Achr10G26160_001 I 0.714
GSMUA_Achr11G17740_001 Musa acuminata GSMUA_Achr11G17740_001 I 0.824
GSMUA_Achr2G15250_001 Musa acuminata GSMUA_Achr2G15250_001 I 0.693
GSMUA_Achr2G18200_001 Musa acuminata GSMUA_Achr2G18200_001 I 0.787
GSMUA_Achr6G05850_001 Musa acuminata GSMUA_Achr6G05850_001 I 0.683
GSMUA_Achr7G11040_001 Musa acuminata GSMUA_Achr7G11040_001 I 0.714
LPERR01G08320 Leersia perrieri LPERR01G08320 I 0.714
LPERR06G12880 Leersia perrieri LPERR06G12880 I 0.696
Lus10011044.g Linum usitatissimum Lus10011044.g I 0.716
Lus10030938.g Linum usitatissimum Lus10030938.g I 0.732
Lus10040109.g Linum usitatissimum Lus10040109.g I 0.737
MDP0000237396 Malus domestica MDP0000237396 I 0.718
MDP0000248863 Malus domestica MDP0000248863 I 0.669
MLOC_43537 Hordeum vulgare MLOC_43537 I 0.696
MTR_4g098870 Medicago truncatula MTR_4g098870 I 0.806
MTR_5g014040 Medicago truncatula MTR_5g014040 I 0.787
OB06G22250 Oryza brachyantha OB06G22250 I 0.696
OBART03G02540 Oryza barthii OBART03G02540 I 0.696
OGLUM01G10130 Oryza glumaepatula OGLUM01G10130 I 0.714
OGLUM06G15080 Oryza glumaepatula OGLUM06G15080 I 0.696
OMERI01G08840 Oryza meridionalis OMERI01G08840 I 0.714
OMERI06G15340 Oryza meridionalis OMERI06G15340 I 0.696
ONIVA01G11450 Oryza nivara ONIVA01G11450 I 0.714
ONIVA06G16920 Oryza nivara ONIVA06G16920 I 0.696
OPUNC01G08680 Oryza punctata OPUNC01G08680 I 0.714
OPUNC06G13180 Oryza punctata OPUNC06G13180 I 0.696
orange1.1g008254m.g Citrus sinensis orange1.1g008254m.g I 0.732
ORGLA01G0079000 Oryza glaberrima ORGLA01G0079000 I 0.681
ORGLA06G0126200 Oryza glaberrima ORGLA06G0126200 I 0.696
ORUFI01G09620 Oryza rufipogon ORUFI01G09620 I 0.714
ORUFI06G15000 Oryza rufipogon ORUFI06G15000 I 0.696
GLK2 Oryza sativa OS01G0239000 I 0.714
GLK1 Oryza sativa OS06G0348800 I 0.696
Pavir.Db01285 Panicum virgatum Pavir.Db01285 I 0.696
Pavir.Ea00014 Panicum virgatum Pavir.Ea00014 I 0.687
Pavir.Eb00063 Panicum virgatum Pavir.Eb00063 I 0.696
PDK_20s1585631g001 Phoenix dactylifera PDK_20s1585631g001 I 0.750
PGSC0003DMG400024217 Solanum tuberosum PGSC0003DMG400024217 I 0.813
PGSC0003DMG400026587 Solanum tuberosum PGSC0003DMG400026587 I 0.775
PK19826.1 Cannabis sativa PK19826.1 I 0.732
Pm014733 Prunus mume Pm014733 I 0.732
POPTR_0001s02910 Populus trichocarpa POPTR_0001s02910 I 0.672
PRUPE_ppa004161mg Prunus persica PRUPE_ppa004161mg I 0.732
SapurV1A.1296s0050 Salix purpurea SapurV1A.1296s0050 I 0.661
Sb03g000400 Sorghum bicolor Sb03g000400 I 0.696
Sb10g008400 Sorghum bicolor Sb10g008400 I 0.696
SELMODRAFT_428906 Selaginella moellendorffii SELMODRAFT_428906 I 0.684
Si001336m.g Setaria italica Si001336m.g I 0.707
Si006400m.g Setaria italica Si006400m.g I 0.696
Solyc06g061030.2 Solanum lycopersicum Solyc06g061030.2 I 0.775
Solyc08g077230.2 Solanum lycopersicum Solyc08g077230.2 I 0.813
TCM_015780 Theobroma cacao TCM_015780 I 0.732
Thhalv10024919m.g Eutrema salsugineum Thhalv10024919m.g I 0.691
Traes_7DL_58DDB90E3 Triticum aestivum Traes_7DL_58DDB90E3 I 0.696
APRR2 Vitis vinifera VIT_02s0012g00570 I 0.679