Cagra.0551s0003 (Capsella grandiflora)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cagra.0551s0003 T285972_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYBP_MAIZE
M11057_2.00 		Zea mays
ACCWACCHN
NDGGTWGGT		 Transfac
Matys et al.(2006)
P$P_01 		0.681 0.794
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0551s0003.1.p Myb 14 61
Cagra.0551s0003.1.p Myb 67 87

Links

Other Myb/SANT family TFs
Other Capsella grandiflora TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA034613 Oryza indica BGIOSGA034613 N 0.000
BGIOSGA036757 Oryza indica BGIOSGA036757 N 0.000
BRADI4G44370 Brachypodium distachyon BRADI4G44370 N 0.000
GRMZM2G169564 Zea mays GRMZM2G169564 N 0.000
GRMZM2G441031 Zea mays GRMZM2G441031 I 0.000
LPERR11G00960 Leersia perrieri LPERR11G00960 I 0.000
LPERR12G01070 Leersia perrieri LPERR12G01070 I 0.000
OBART11G01100 Oryza barthii OBART11G01100 N 0.000
OGLUM11G00850 Oryza glumaepatula OGLUM11G00850 I 0.000
OGLUM12G01400 Oryza glumaepatula OGLUM12G01400 N 0.000
OMERI11G01520 Oryza meridionalis OMERI11G01520 N 0.000
ONIVA11G01050 Oryza nivara ONIVA11G01050 N 0.000
ONIVA11G01230 Oryza nivara ONIVA11G01230 N 0.000
OPUNC11G00970 Oryza punctata OPUNC11G00970 N 0.000
OPUNC12G00970 Oryza punctata OPUNC12G00970 N 0.000
ORGLA11G0201900 Oryza glaberrima ORGLA11G0201900 N 0.000
ORGLA12G0007500 Oryza glaberrima ORGLA12G0007500 N 0.000
OS11G0117400 Oryza sativa OS11G0117400 N 0.000
OS12G0116600 Oryza sativa OS12G0116600 N 0.000
Sb08g002570 Sorghum bicolor Sb08g002570 N 0.000
Si010832m.g Setaria italica Si010832m.g N 0.000
Si019098m.g Setaria italica Si019098m.g N 0.000
Si027360m.g Setaria italica Si027360m.g N 0.000