Ciclev10005329m.g (Citrus clementina)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ciclev10005329m.g T286501_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASR3
M07053_2.00 		Arabidopsis thaliana
DNNNNHHWNDRCCCTWAW
WTWAGGGYHNWDDNNNNH		 Dap-seq
OMalley et al.(2016)
AT2G33550_col_a 		0.909 1.000
ASR3
M07054_2.00 		Arabidopsis thaliana
NHWDDTRCCCTWMW
WKWAGGGYAHHWDN		 Dap-seq
OMalley et al.(2016)
AT2G33550_colamp_a 		0.909 1.000
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10005329m Myb 46 113

Links

Other Myb/SANT family TFs
Other Citrus clementina TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R008050 Calypte anna Aan_R008050 N
Afo_R011854 Aptenodytes forsteri Afo_R011854 N
Alligator_sinensis_CCG016138.1 Alligator sinensis Alligator_sinensis_CCG016138.1 N
ENSAMXG00000009099 Astyanax mexicanus ENSAMXG00000009099 N
ZNF618 Bos taurus ENSBTAG00000025659 N
ZNF618 Canis familiaris ENSCAFG00000003282 N
ZNF618 Cavia porcellus ENSCPOG00000010468 N
ZNF618 Dasypus novemcinctus ENSDNOG00000012611 N
Zfp618 Dipodomys ordii ENSDORG00000014008 N
ZNF618 Equus caballus ENSECAG00000020621 N
ZNF618 Felis catus ENSFCAG00000013342 N
ZNF618 Homo sapiens ENSG00000157657 N
znf618 Gasterosteus aculeatus ENSGACG00000016617 N
ZNF618 Gallus gallus ENSGALG00000008886 N
ZNF618 Gorilla gorilla ENSGGOG00000014177 N
ENSLACG00000009597 Latimeria chalumnae ENSLACG00000009597 N
ZNF618 Loxodonta africana ENSLAFG00000011286 N
ZNF618 Meleagris gallopavo ENSMGAG00000001586 N
ZNF618 Microcebus murinus ENSMICG00000015151 N
ZNF618 Macaca mulatta ENSMMUG00000008557 N
ZNF618 Monodelphis domestica ENSMODG00000004063 N
ENSMPUG00000008085 Mustela putorius furo ENSMPUG00000008085 N
Zfp618 Mus musculus ENSMUSG00000028358 N
ENSNLEG00000016765 Nomascus leucogenys ENSNLEG00000016765 N
ZNF618 Ornithorhynchus anatinus ENSOANG00000005539 N
ENSOARG00000006161 Ovis aries ENSOARG00000006161 N
ZNF618 Oryctolagus cuniculus ENSOCUG00000002794 N
ZNF618 Otolemur garnettii ENSOGAG00000014816 N
ENSONIG00000015003 Oreochromis niloticus ENSONIG00000015003 N
ZNF618 Ochotona princeps ENSOPRG00000005497 N
ENSP00000363241 Macaca fascicularis ENSP00000363241 N
ENSP00000363241-D1 Bos grunniens ENSP00000363241-D1 N
ZNF618 Procavia capensis ENSPCAG00000000187 N
ENSPPYG00000019526 Pongo abelii ENSPPYG00000019526 N
ENSPSIG00000016588 Pelodiscus sinensis ENSPSIG00000016588 N
ZNF618 Pteropus vampyrus ENSPVAG00000011944 N
Zfp618 Rattus norvegicus ENSRNOG00000006719 N
ENSSHAG00000015909 Sarcophilus harrisii ENSSHAG00000015909 N
ZNF618 Sus scrofa ENSSSCG00000005484 N
ENSSTOG00000022322 Ictidomys tridecemlineatus ENSSTOG00000022322 N
ZNF618 Tupaia belangeri ENSTBEG00000000415 N
ZNF618 Taeniopygia guttata ENSTGUG00000002591 N
znf618 Tetraodon nigroviridis ENSTNIG00000018743 N
ZNF618 Tursiops truncatus ENSTTRG00000005353 N
Gfo_R015405 Geospiza fortis Gfo_R015405 N
Myotis_brandtii_ZNF618_10028443 Myotis brandtii Myotis_brandtii_ZNF618_10028443 N