Eucgr.F00002 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.F00002 T286853_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.770 0.882
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.770 0.882
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.770 0.882
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.770 0.882
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.766 0.871
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.766 0.871
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.766 0.871
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.748 0.871
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.748 0.871
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.748 0.871
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.748 0.871
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.748 0.871
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.736 0.796
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.F00002.1 Myb 18 64
Eucgr.F00002.1 Myb 70 115

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

321 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30131.m007029 Ricinus communis 30131.m007029 N 0.000
Aquca_011_00061 Aquilegia coerulea Aquca_011_00061 N 0.000
Aquca_021_00065 Aquilegia coerulea Aquca_021_00065 N 0.000
BRADI4G18390 Brachypodium distachyon BRADI4G18390 N 0.000
cassava38785.m1 Manihot esculenta cassava38785.m1 N 0.000
Ciclev10018153m.g Citrus clementina Ciclev10018153m.g N 0.000
Cla012038 Citrullus lanatus Cla012038 N 0.000
Cucsa.087900 Cucumis sativus Cucsa.087900 N 0.000
Eucgr.I01625 Eucalyptus grandis Eucgr.I01625 N 0.000
evm.TU.supercontig_70.116 Carica papaya evm.TU.supercontig_70.116 N 0.000
gene01356-v1.0-hybrid Fragaria vesca gene01356-v1.0-hybrid N 0.000
GLYMA16G05751 Glycine max GLYMA16G05751 N 0.000
GLYMA19G26735 Glycine max GLYMA19G26735 N 0.000
Gorai.006G044300 Gossypium raimondii Gorai.006G044300 N 0.000
GRMZM2G342217 Zea mays GRMZM2G342217 N 0.000
LPERR11G11520 Leersia perrieri LPERR11G11520 N 0.000
Lus10012554.g Linum usitatissimum Lus10012554.g N 0.000
Lus10041540.g Linum usitatissimum Lus10041540.g N 0.000
mgf025393m Mimulus guttatus mgf025393m N 0.000
MTR_7g027190 Medicago truncatula MTR_7g027190 N 0.000
OBART11G14550 Oryza barthii OBART11G14550 N 0.000
OGLUM11G14080 Oryza glumaepatula OGLUM11G14080 N 0.000
ONIVA11G13990 Oryza nivara ONIVA11G13990 N 0.000
OPUNC11G12230 Oryza punctata OPUNC11G12230 N 0.000
orange1.1g045762m.g Citrus sinensis orange1.1g045762m.g N 0.000
ORGLA11G0124900 Oryza glaberrima ORGLA11G0124900 N 0.000
Pavir.J25769 Panicum virgatum Pavir.J25769 N 0.000
PGSC0003DMG400020243 Solanum tuberosum PGSC0003DMG400020243 N 0.000
Pm016121 Prunus mume Pm016121 N 0.000
POPTR_0001s33360 Populus trichocarpa POPTR_0001s33360 N 0.000
PRUPE_ppa024399mg Prunus persica PRUPE_ppa024399mg N 0.000
Sb05g018070 Sorghum bicolor Sb05g018070 N 0.000
Si027708m.g Setaria italica Si027708m.g N 0.000
Solyc02g094340.1 Solanum lycopersicum Solyc02g094340.1 N 0.000
TCM_017269 Theobroma cacao TCM_017269 N 0.000
Traes_2BS_D32231DB0 Triticum aestivum Traes_2BS_D32231DB0 N 0.000