Gorai.002G021600 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.002G021600 T287486_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASR3
M07053_2.00 		Arabidopsis thaliana
DNNNNHHWNDRCCCTWAW
WTWAGGGYHNWDDNNNNH		 Dap-seq
OMalley et al.(2016)
AT2G33550_col_a 		0.909 1.000
ASR3
M07054_2.00 		Arabidopsis thaliana
NHWDDTRCCCTWMW
WKWAGGGYAHHWDN		 Dap-seq
OMalley et al.(2016)
AT2G33550_colamp_a 		0.909 1.000
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.002G021600.1 Myb 49 116

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28859.m000324 Ricinus communis 28859.m000324 N
29758.m000681 Ricinus communis 29758.m000681 N
FRS10 Arabidopsis thaliana AT5G28530 N
Bo2g152930 Brassica oleracea Bo2g152930 N
Bostr.29827s0002 Boechera stricta Bostr.29827s0002 N
Cagra.13833s0001 Capsella grandiflora Cagra.13833s0001 N
Carubv10000250m.g Capsella rubella Carubv10000250m.g N
cassava40276.m1 Manihot esculenta cassava40276.m1 N
cassava40936.m1 Manihot esculenta cassava40936.m1 N
Ciclev10014474m.g Citrus clementina Ciclev10014474m.g N
Ciclev10014481m.g Citrus clementina Ciclev10014481m.g N
Cucsa.044640 Cucumis sativus Cucsa.044640 N
Eucgr.D01451 Eucalyptus grandis Eucgr.D01451 N
Eucgr.D01455 Eucalyptus grandis Eucgr.D01455 N
Eucgr.H00883 Eucalyptus grandis Eucgr.H00883 N
Eucgr.L00168 Eucalyptus grandis Eucgr.L00168 N
gene15606-v1.0-hybrid Fragaria vesca gene15606-v1.0-hybrid N
gene19817-v1.0-hybrid Fragaria vesca gene19817-v1.0-hybrid N
GLYMA09G01540 Glycine max GLYMA09G01540 N
Gorai.005G129200 Gossypium raimondii Gorai.005G129200 N
Gorai.010G189600 Gossypium raimondii Gorai.010G189600 N
MDP0000249284 Malus domestica MDP0000249284 N
mgf004308m Mimulus guttatus mgf004308m N
orange1.1g005549m.g Citrus sinensis orange1.1g005549m.g N
orange1.1g005579m.g Citrus sinensis orange1.1g005579m.g N
PK07950.1 Cannabis sativa PK07950.1 N
PK09224.1 Cannabis sativa PK09224.1 N
Pm015052 Prunus mume Pm015052 N
FRS10 Populus trichocarpa POPTR_0014s16500 N
POPTR_0016s00900 Populus trichocarpa POPTR_0016s00900 N
PRUPE_ppa002276mg Prunus persica PRUPE_ppa002276mg N
PRUPE_ppa002284mg Prunus persica PRUPE_ppa002284mg N
SapurV1A.0054s0360 Salix purpurea SapurV1A.0054s0360 N
SapurV1A.0089s0660 Salix purpurea SapurV1A.0089s0660 N
Solyc07g045520.2 Solanum lycopersicum Solyc07g045520.2 N
TCM_020251 Theobroma cacao TCM_020251 N
TCM_030416 Theobroma cacao TCM_030416 N
Thhalv10003748m.g Eutrema salsugineum Thhalv10003748m.g N
VIT_00s0194g00200 Vitis vinifera VIT_00s0194g00200 N
FRS10 Vitis vinifera VIT_12s0057g00960 N