Gorai.009G329400 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.009G329400 T287731_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK26523.1
M01283_2.00 		Cannabis sativa
NWHATTCYNN
NNRGAATDWN		 PBM
Lambert et al.(2019)
pTH11304 		0.802 0.830
AT2G40260
M07057_2.00 		Arabidopsis thaliana
HHWDWAHATTCYHTN
NADRGAATDTWHWDD		 Dap-seq
OMalley et al.(2016)
AT2G40260_col_a 		0.793 0.830
AT2G40260
M07058_2.00 		Arabidopsis thaliana
NNDDWHHNDDWAHATTCYHT
ADRGAATDTWHHNDDWHHNN		 Dap-seq
OMalley et al.(2016)
AT2G40260_colamp_a 		0.793 0.830
AT1G14600
M01268_2.00 		Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN		 PBM
Lambert et al.(2019)
pTH11557 		0.750 0.851
AT2G38300
M07056_2.00 		Arabidopsis thaliana
WAHATTCYHTH
DADRGAATDTW		 Dap-seq
OMalley et al.(2016)
AT2G38300_col_a 		0.725 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G329400.1 Myb 21 72
Gorai.009G329400.3 Myb 21 72

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

501 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29726.m003959 Ricinus communis 29726.m003959 I
AMTR_s00197p00030350 Amborella trichopoda AMTR_s00197p00030350 I
Aquca_026_00098 Aquilegia coerulea Aquca_026_00098 I
SPL7 Arabidopsis thaliana AT5G18830 D
Bo00629s160 Brassica oleracea Bo00629s160 I
Bo9g154530 Brassica oleracea Bo9g154530 I
Bostr.26527s0326 Boechera stricta Bostr.26527s0326 I
Bra002188 Brassica rapa Bra002188 I
Bra023695 Brassica rapa Bra023695 I
BRADI2G25580 Brachypodium distachyon BRADI2G25580 I
Cagra.0263s0012 Capsella grandiflora Cagra.0263s0012 I
Carubv10002913m.g Capsella rubella Carubv10002913m.g I
cassava1985.valid.m1 Manihot esculenta cassava1985.valid.m1 I
cassava7955.valid.m1 Manihot esculenta cassava7955.valid.m1 I
cassava7956.valid.m1 Manihot esculenta cassava7956.valid.m1 I
Ca_00550 Cicer arietinum Ca_00550 I
Ciclev10004348m.g Citrus clementina Ciclev10004348m.g I
Cla022022 Citrullus lanatus Cla022022 I
Cucsa.253690 Cucumis sativus Cucsa.253690 I
Eucgr.B01228 Eucalyptus grandis Eucgr.B01228 I
F775_04392 Aegilops tauschii F775_04392 I
gene06692-v1.0-hybrid Fragaria vesca gene06692-v1.0-hybrid I
GLYMA13G28460 Glycine max GLYMA13G28460 I
Gorai.005G056500 Gossypium raimondii Gorai.005G056500 I
Gorai.011G183800 Gossypium raimondii Gorai.011G183800 I
GRMZM2G109354 Zea mays GRMZM2G109354 I
GSMUA_Achr3G09190_001 Musa acuminata GSMUA_Achr3G09190_001 I
GSMUA_Achr3G23780_001 Musa acuminata GSMUA_Achr3G23780_001 I
GSMUA_Achr5G26880_001 Musa acuminata GSMUA_Achr5G26880_001 I
GSMUA_Achr9G17440_001 Musa acuminata GSMUA_Achr9G17440_001 I
LPERR05G12780 Leersia perrieri LPERR05G12780 I
Lus10012782.g Linum usitatissimum Lus10012782.g I
Lus10033993.g Linum usitatissimum Lus10033993.g I
MDP0000195461 Malus domestica MDP0000195461 I
MDP0000271587 Malus domestica MDP0000271587 I
mgf004695m Mimulus guttatus mgf004695m I
MTR_2g020620 Medicago truncatula MTR_2g020620 I
OB05G24080 Oryza brachyantha OB05G24080 I
OBART05G16150 Oryza barthii OBART05G16150 I
OGLUM05G17090 Oryza glumaepatula OGLUM05G17090 I
OLONG_015968 Oryza longistaminata OLONG_015968 I
ONIVA05G16770 Oryza nivara ONIVA05G16770 I
OPUNC05G14270 Oryza punctata OPUNC05G14270 I
orange1.1g003787m.g Citrus sinensis orange1.1g003787m.g I
ORUFI05G17320 Oryza rufipogon ORUFI05G17320 I
Pavir.J00965 Panicum virgatum Pavir.J00965 I
Pavir.J03653 Panicum virgatum Pavir.J03653 I
PGSC0003DMG401006284 Solanum tuberosum PGSC0003DMG401006284 I
PK29723.1 Cannabis sativa PK29723.1 I
Pm008092 Prunus mume Pm008092 I
POPTR_0008s20160 Populus trichocarpa POPTR_0008s20160 I
POPTR_0010s02710 Populus trichocarpa POPTR_0010s02710 I
PRUPE_ppa001613mg Prunus persica PRUPE_ppa001613mg I
SapurV1A.0152s0370 Salix purpurea SapurV1A.0152s0370 I
SapurV1A.0407s0040 Salix purpurea SapurV1A.0407s0040 I
Sb09g020110 Sorghum bicolor Sb09g020110 I
SPL7 Arabidopsis lyrata scaffold_601959.1 I
SELMODRAFT_49859 Selaginella moellendorffii SELMODRAFT_49859 I
SELMODRAFT_49860 Selaginella moellendorffii SELMODRAFT_49860 I
Si021754m.g Setaria italica Si021754m.g I
Solyc01g080670.2 Solanum lycopersicum Solyc01g080670.2 I
TCM_021101 Theobroma cacao TCM_021101 I
Thhalv10012721m.g Eutrema salsugineum Thhalv10012721m.g I
Traes_1BL_8709BB152 Triticum aestivum Traes_1BL_8709BB152 I
SPL7 Vitis vinifera VIT_05s0020g02160 I