orange1.1g044864m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g044864m.g T288926_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3
M02288_2.00 		Arabidopsis thaliana
NNYACCTACCN
NGGTAGGTRNN		 PBM
Weirauch et al.(2014)
pTH7125 		0.787 0.796
MYB4
M02303_2.00 		Arabidopsis thaliana
YACCWACY
RGTWGGTR		 PBM
Weirauch et al.(2014)
pTH7075 		0.759 0.763
MYB4
M07115_2.00 		Arabidopsis thaliana
NYYACCWAMHWHNDD
HHNDWDKTWGGTRRN		 Dap-seq
OMalley et al.(2016)
MYB4_col200_a 		0.759 0.763
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.671 0.699
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.671 0.699
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.671 0.699
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.664 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g044864m Myb 13 60
orange1.1g044864m Myb 66 111

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

479 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29929.m004749 Ricinus communis 29929.m004749 I 0.000
30190.m011004 Ricinus communis 30190.m011004 I 0.000
AMTR_s00049p00074250 Amborella trichopoda AMTR_s00049p00074250 I 0.000
Aquca_011_00322 Aquilegia coerulea Aquca_011_00322 I 0.000
Aquca_011_00323 Aquilegia coerulea Aquca_011_00323 I 0.000
Aquca_013_00661 Aquilegia coerulea Aquca_013_00661 I 0.000
MYB20 Arabidopsis thaliana AT1G66230 I 0.000
AtMYB40 Arabidopsis thaliana AT5G14340 D 0.000
MYB43 Arabidopsis thaliana AT5G16600 D 0.000
BGIOSGA005676 Oryza indica BGIOSGA005676 I 0.000
BGIOSGA026529 Oryza indica BGIOSGA026529 I 0.000
BGIOSGA029380 Oryza indica BGIOSGA029380 I 0.000
Bo2g013190 Brassica oleracea Bo2g013190 I 0.000
Bo3g009730 Brassica oleracea Bo3g009730 I 0.000
Bo4g101470 Brassica oleracea Bo4g101470 I 0.000
Bo6g099800 Brassica oleracea Bo6g099800 I 0.000
Bo9g163020 Brassica oleracea Bo9g163020 I 0.000
Bo9g166000 Brassica oleracea Bo9g166000 I 0.000
Bostr.26959s0295 Boechera stricta Bostr.26959s0295 I 0.000
Bostr.2902s0170 Boechera stricta Bostr.2902s0170 I 0.000
Bostr.2902s0397 Boechera stricta Bostr.2902s0397 I 0.000
Bra004155 Brassica rapa Bra004155 I 0.000
Bra006249 Brassica rapa Bra006249 I 0.000
Bra008764 Brassica rapa Bra008764 I 0.000
BRADI3G42430 Brachypodium distachyon BRADI3G42430 I 0.000
BRADI3G56917 Brachypodium distachyon BRADI3G56917 I 0.000
BRADI4G29796 Brachypodium distachyon BRADI4G29796 I 0.000
Cagra.0434s0026 Capsella grandiflora Cagra.0434s0026 I 0.000
Cagra.1300s0004 Capsella grandiflora Cagra.1300s0004 I 0.000
Cagra.3166s0041 Capsella grandiflora Cagra.3166s0041 I 0.000
Carubv10001378m.g Capsella rubella Carubv10001378m.g I 0.000
Carubv10020766m.g Capsella rubella Carubv10020766m.g I 0.000
cassava15064.m1 Manihot esculenta cassava15064.m1 I 0.000
cassava17364.m1 Manihot esculenta cassava17364.m1 I 0.000
cassava2058.valid.m1 Manihot esculenta cassava2058.valid.m1 I 0.000
cassava21367.m1 Manihot esculenta cassava21367.m1 I 0.000
cassava30009.valid.m1 Manihot esculenta cassava30009.valid.m1 I 0.000
cassava33331.m1 Manihot esculenta cassava33331.m1 I 0.000
cassava3745.m1 Manihot esculenta cassava3745.m1 I 0.000
cassava47045.m1 Manihot esculenta cassava47045.m1 I 0.000
cassava6251.valid.m1 Manihot esculenta cassava6251.valid.m1 I 0.000
Ca_08722 Cicer arietinum Ca_08722 I 0.000
Ca_13286 Cicer arietinum Ca_13286 I 0.000
Ca_19393 Cicer arietinum Ca_19393 I 0.000
chr4.CM0126.370.nd Lotus japonicus chr4.CM0126.370.nd I 0.000
Ciclev10005666m.g Citrus clementina Ciclev10005666m.g I 0.000
Ciclev10012265m.g Citrus clementina Ciclev10012265m.g I 0.000
Ciclev10017764m.g Citrus clementina Ciclev10017764m.g I 0.000
Ciclev10021695m.g Citrus clementina Ciclev10021695m.g I 0.000
Cla003626 Citrullus lanatus Cla003626 I 0.000
Cla004104 Citrullus lanatus Cla004104 I 0.000
Cla011736 Citrullus lanatus Cla011736 I 0.000
Cucsa.006170 Cucumis sativus Cucsa.006170 I 0.000
Cucsa.156340 Cucumis sativus Cucsa.156340 I 0.000
Cucsa.302180 Cucumis sativus Cucsa.302180 I 0.000
Cucsa.375180 Cucumis sativus Cucsa.375180 I 0.000
Eucgr.D02014 Eucalyptus grandis Eucgr.D02014 I 0.000
Eucgr.F02864 Eucalyptus grandis Eucgr.F02864 I 0.000
Eucgr.I01698 Eucalyptus grandis Eucgr.I01698 I 0.000
Eucgr.J01601 Eucalyptus grandis Eucgr.J01601 I 0.000
Eucgr.J02279 Eucalyptus grandis Eucgr.J02279 I 0.000
evm.TU.supercontig_1097.3 Carica papaya evm.TU.supercontig_1097.3 I 0.000
evm.TU.supercontig_3.300 Carica papaya evm.TU.supercontig_3.300 I 0.000
F775_13107 Aegilops tauschii F775_13107 I 0.000
F775_17058 Aegilops tauschii F775_17058 I 0.000
F775_19511 Aegilops tauschii F775_19511 I 0.000
MYB42 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002571 I 0.000
gene28021-v1.0-hybrid Fragaria vesca gene28021-v1.0-hybrid I 0.000
gene30520-v1.0-hybrid Fragaria vesca gene30520-v1.0-hybrid I 0.000
gene32268-v1.0-hybrid Fragaria vesca gene32268-v1.0-hybrid I 0.000
GLYMA01G42050 Glycine max GLYMA01G42050 I 0.000
GLYMA02G41180 Glycine max GLYMA02G41180 I 0.000
GLYMA05G03780 Glycine max GLYMA05G03780 I 0.000
GLYMA05G06410 Glycine max GLYMA05G06410 I 0.000
GLYMA11G03300 Glycine max GLYMA11G03300 I 0.000
GLYMA11G33620 Glycine max GLYMA11G33620 I 0.000
GLYMA14G39530 Glycine max GLYMA14G39530 I 0.000
GLYMA16G06900 Glycine max GLYMA16G06900 I 0.000
GLYMA17G14291 Glycine max GLYMA17G14291 I 0.000
GLYMA18G04580 Glycine max GLYMA18G04580 I 0.000
GLYMA19G07830 Glycine max GLYMA19G07830 I 0.000
Gorai.001G205300 Gossypium raimondii Gorai.001G205300 I 0.000
Gorai.001G268000 Gossypium raimondii Gorai.001G268000 I 0.000
Gorai.003G168100 Gossypium raimondii Gorai.003G168100 I 0.000
Gorai.004G064100 Gossypium raimondii Gorai.004G064100 I 0.000
Gorai.004G201900 Gossypium raimondii Gorai.004G201900 I 0.000
Gorai.006G037500 Gossypium raimondii Gorai.006G037500 I 0.000
Gorai.006G064000 Gossypium raimondii Gorai.006G064000 I 0.000
Gorai.006G195700 Gossypium raimondii Gorai.006G195700 I 0.000
Gorai.007G074500 Gossypium raimondii Gorai.007G074500 I 0.000
Gorai.008G060100 Gossypium raimondii Gorai.008G060100 I 0.000
Gorai.008G238800 Gossypium raimondii Gorai.008G238800 I 0.000
GRMZM2G037650 Zea mays GRMZM2G037650 I 0.000
GRMZM2G055158 Zea mays GRMZM2G055158 I 0.000
GRMZM2G104551 Zea mays GRMZM2G104551 I 0.000
GRMZM2G106558 Zea mays GRMZM2G106558 I 0.000
GRMZM2G138427 Zea mays GRMZM2G138427 I 0.000
GSMUA_Achr1G18610_001 Musa acuminata GSMUA_Achr1G18610_001 I 0.000
GSMUA_Achr4G19880_001 Musa acuminata GSMUA_Achr4G19880_001 I 0.000
GSMUA_Achr5G23110_001 Musa acuminata GSMUA_Achr5G23110_001 I 0.000
GSMUA_Achr6G06800_001 Musa acuminata GSMUA_Achr6G06800_001 I 0.000
GSMUA_Achr7G05680_001 Musa acuminata GSMUA_Achr7G05680_001 I 0.000
GSMUA_Achr7G12520_001 Musa acuminata GSMUA_Achr7G12520_001 I 0.000
GSMUA_AchrUn_randomG11880_001 Musa acuminata GSMUA_AchrUn_randomG11880_001 N 0.000
Lus10004042.g Linum usitatissimum Lus10004042.g I 0.000
Lus10014569.g Linum usitatissimum Lus10014569.g I 0.000
Lus10024589.g Linum usitatissimum Lus10024589.g I 0.000
Lus10027197.g Linum usitatissimum Lus10027197.g I 0.000
Lus10032117.g Linum usitatissimum Lus10032117.g I 0.000
Lus10032226.g Linum usitatissimum Lus10032226.g I 0.000
Lus10038913.g Linum usitatissimum Lus10038913.g I 0.000
MDP0000241111 Malus domestica MDP0000241111 I 0.000
MDP0000303239 Malus domestica MDP0000303239 I 0.000
MDP0000602739 Malus domestica MDP0000602739 I 0.000
MDP0000682032 Malus domestica MDP0000682032 I 0.000
MDP0000787808 Malus domestica MDP0000787808 I 0.000
mgf017719m Mimulus guttatus mgf017719m I 0.000
mgf018940m Mimulus guttatus mgf018940m I 0.000
mgf025004m Mimulus guttatus mgf025004m I 0.000
MLOC_50944 Hordeum vulgare MLOC_50944 I 0.000
MTR_3g065440 Medicago truncatula MTR_3g065440 I 0.000
MTR_4g102380 Medicago truncatula MTR_4g102380 I 0.000
MTR_5g078140 Medicago truncatula MTR_5g078140 I 0.000
OB02G38450 Oryza brachyantha OB02G38450 I 0.000
OB08G22860 Oryza brachyantha OB08G22860 I 0.000
OB08G29480 Oryza brachyantha OB08G29480 I 0.000
OB09G24070 Oryza brachyantha OB09G24070 I 0.000
OGLUM02G32070 Oryza glumaepatula OGLUM02G32070 I 0.000
OLONG_005336 Oryza longistaminata OLONG_005336 I 0.000
orange1.1g021498m.g Citrus sinensis orange1.1g021498m.g I 0.000
orange1.1g024441m.g Citrus sinensis orange1.1g024441m.g I 0.000
orange1.1g024849m.g Citrus sinensis orange1.1g024849m.g I 0.000
ORGLA02G0269000 Oryza glaberrima ORGLA02G0269000 I 0.000
ORGLA08G0217800 Oryza glaberrima ORGLA08G0217800 I 0.000
ORGLA09G0137500 Oryza glaberrima ORGLA09G0137500 I 0.000
ORUFI02G33090 Oryza rufipogon ORUFI02G33090 I 0.000
ORUFI08G25210 Oryza rufipogon ORUFI08G25210 I 0.000
OS02G0732600 Oryza sativa OS02G0732600 I 0.000
OS09G0532900 Oryza sativa OS09G0532900 I 0.000
Pavir.Aa00435 Panicum virgatum Pavir.Aa00435 I 0.000
Pavir.Ab02913 Panicum virgatum Pavir.Ab02913 I 0.000
Pavir.Ba01239 Panicum virgatum Pavir.Ba01239 I 0.000
Pavir.Bb02654 Panicum virgatum Pavir.Bb02654 I 0.000
Pavir.Da01229 Panicum virgatum Pavir.Da01229 I 0.000
Pavir.Fa00850 Panicum virgatum Pavir.Fa00850 I 0.000
Pavir.Fb01563 Panicum virgatum Pavir.Fb01563 I 0.000
Pavir.Fb02321 Panicum virgatum Pavir.Fb02321 I 0.000
Pavir.J36915 Panicum virgatum Pavir.J36915 I 0.000
PDK_20s1306131g002 Phoenix dactylifera PDK_20s1306131g002 I 0.000
PGSC0003DMG400004780 Solanum tuberosum PGSC0003DMG400004780 I 0.000
PGSC0003DMG400011976 Solanum tuberosum PGSC0003DMG400011976 I 0.000
PGSC0003DMG400012648 Solanum tuberosum PGSC0003DMG400012648 I 0.000
PGSC0003DMG400015668 Solanum tuberosum PGSC0003DMG400015668 I 0.000
PK08857.1 Cannabis sativa PK08857.1 I 0.000
PK21166.1 Cannabis sativa PK21166.1 D 0.000
Pm013020 Prunus mume Pm013020 I 0.000
Pm015564 Prunus mume Pm015564 I 0.000
Pm019472 Prunus mume Pm019472 I 0.000
Pm023573 Prunus mume Pm023573 I 0.000
POPTR_0001s07830 Populus trichocarpa POPTR_0001s07830 I 0.000
POPTR_0001s36220 Populus trichocarpa POPTR_0001s36220 I 0.000
POPTR_0003s11360 Populus trichocarpa POPTR_0003s11360 I 0.000
POPTR_0004s08480 Populus trichocarpa POPTR_0004s08480 I 0.000
AtMYB40 Populus trichocarpa POPTR_0008s18110 I 0.000
POPTR_0015s14600 Populus trichocarpa POPTR_0015s14600 I 0.000
POPTR_0017s02850 Populus trichocarpa POPTR_0017s02850 I 0.000
PRUPE_ppa009966mg Prunus persica PRUPE_ppa009966mg I 0.000
PRUPE_ppa011549mg Prunus persica PRUPE_ppa011549mg I 0.000
PRUPE_ppa021568mg Prunus persica PRUPE_ppa021568mg I 0.000
PRUPE_ppa026877mg Prunus persica PRUPE_ppa026877mg I 0.000
SapurV1A.0045s0090 Salix purpurea SapurV1A.0045s0090 I 0.000
SapurV1A.0102s0470 Salix purpurea SapurV1A.0102s0470 I 0.000
SapurV1A.0206s0260 Salix purpurea SapurV1A.0206s0260 I 0.000
SapurV1A.0367s0020 Salix purpurea SapurV1A.0367s0020 I 0.000
SapurV1A.0390s0060 Salix purpurea SapurV1A.0390s0060 I 0.000
SapurV1A.0456s0310 Salix purpurea SapurV1A.0456s0310 I 0.000
SapurV1A.0634s0020 Salix purpurea SapurV1A.0634s0020 I 0.000
SapurV1A.1318s0060 Salix purpurea SapurV1A.1318s0060 I 0.000
Sb02g030900 Sorghum bicolor Sb02g030900 I 0.000
Sb04g028850 Sorghum bicolor Sb04g028850 I 0.000
MYB20 Arabidopsis lyrata scaffold_201335.1 I 0.000
MYB43 Arabidopsis lyrata scaffold_601700.1 I 0.000
Si020225m.g Setaria italica Si020225m.g I 0.000
Si030750m.g Setaria italica Si030750m.g I 0.000
Solyc02g093740.2 Solanum lycopersicum Solyc02g093740.2 I 0.000
Solyc04g014470.2 Solanum lycopersicum Solyc04g014470.2 I 0.000
Solyc05g014290.2 Solanum lycopersicum Solyc05g014290.2 I 0.000
Solyc08g079270.2 Solanum lycopersicum Solyc08g079270.2 I 0.000
Solyc11g011050.1 Solanum lycopersicum Solyc11g011050.1 I 0.000
TCM_014956 Theobroma cacao TCM_014956 I 0.000
TCM_016054 Theobroma cacao TCM_016054 I 0.000
TCM_017051 Theobroma cacao TCM_017051 I 0.000
TCM_019116 Theobroma cacao TCM_019116 I 0.000
Thhalv10014086m.g Eutrema salsugineum Thhalv10014086m.g I 0.000
Thhalv10014425m.g Eutrema salsugineum Thhalv10014425m.g I 0.000
Thhalv10019852m.g Eutrema salsugineum Thhalv10019852m.g I 0.000
Traes_5BL_30D8E6BE2 Triticum aestivum Traes_5BL_30D8E6BE2 I 0.000
Traes_5BL_D85C0EF26 Triticum aestivum Traes_5BL_D85C0EF26 I 0.000
Traes_5DL_0B2C5ADF6 Triticum aestivum Traes_5DL_0B2C5ADF6 I 0.000
Traes_5DL_46D39C394 Triticum aestivum Traes_5DL_46D39C394 I 0.000
TRIUR3_16495 Triticum urartu TRIUR3_16495 I 0.000
VIT_00s1241g00010 Vitis vinifera VIT_00s1241g00010 I 0.000
MYB43 Vitis vinifera VIT_14s0006g00450 I 0.000
AtMYB40 Vitis vinifera VIT_14s0219g00050 I 0.000
VIT_16s0022g01210 Vitis vinifera VIT_16s0022g01210 I 0.000