Pavir.Aa00126 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Aa00126 T288958_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Aa00126.1.p Myb 255 303

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00056p00204920 Amborella trichopoda AMTR_s00056p00204920 I
BGIOSGA004221 Oryza indica BGIOSGA004221 I
BGIOSGA004364 Oryza indica BGIOSGA004364 N
BRADI2G17280 Brachypodium distachyon BRADI2G17280 N
cassava11642.m1 Manihot esculenta cassava11642.m1 I
Ciclev10009336m.g Citrus clementina Ciclev10009336m.g I
Cucsa.288590 Cucumis sativus Cucsa.288590 I
Eucgr.C00624 Eucalyptus grandis Eucgr.C00624 I
F775_22184 Aegilops tauschii F775_22184 I
F775_22442 Aegilops tauschii F775_22442 N
F775_22853 Aegilops tauschii F775_22853 N
GLYMA14G10483 Glycine max GLYMA14G10483 I
GLYMA17G35020 Glycine max GLYMA17G35020 I
Gorai.001G024300 Gossypium raimondii Gorai.001G024300 I
GRMZM2G001875 Zea mays GRMZM2G001875 N
GRMZM2G069325 Zea mays GRMZM2G069325 I
GRMZM2G151205 Zea mays GRMZM2G151205 N
GRMZM2G167829 Zea mays GRMZM2G167829 N
GSMUA_Achr9G09790_001 Musa acuminata GSMUA_Achr9G09790_001 I
LPERR05G20870 Leersia perrieri LPERR05G20870 I
mgf017404m Mimulus guttatus mgf017404m I
MLOC_5098 Hordeum vulgare MLOC_5098 I
MLOC_67874 Hordeum vulgare MLOC_67874 N
MTR_6g090405 Medicago truncatula MTR_6g090405 I
OBART01G26850 Oryza barthii OBART01G26850 I
OBART01G29250 Oryza barthii OBART01G29250 N
OGLUM01G30780 Oryza glumaepatula OGLUM01G30780 I
OGLUM01G33320 Oryza glumaepatula OGLUM01G33320 N
ONIVA01G33470 Oryza nivara ONIVA01G33470 N
orange1.1g037024m.g Citrus sinensis orange1.1g037024m.g I
ORGLA01G0219900 Oryza glaberrima ORGLA01G0219900 I
ORUFI01G29860 Oryza rufipogon ORUFI01G29860 I
ORUFI01G32340 Oryza rufipogon ORUFI01G32340 N
OS01G0722300 Oryza sativa OS01G0722300 N
Pavir.Ea00256 Panicum virgatum Pavir.Ea00256 N
Pavir.Ea02676 Panicum virgatum Pavir.Ea02676 N
Pavir.Eb00254 Panicum virgatum Pavir.Eb00254 N
Pavir.Eb02926 Panicum virgatum Pavir.Eb02926 N
Pavir.J11789 Panicum virgatum Pavir.J11789 I
Pavir.J15551 Panicum virgatum Pavir.J15551 I
PGSC0003DMG400000349 Solanum tuberosum PGSC0003DMG400000349 I
Sb03g003120 Sorghum bicolor Sb03g003120 N
Sb03g033160 Sorghum bicolor Sb03g033160 N
Sb09g027800 Sorghum bicolor Sb09g027800 I
Si002629m.g Setaria italica Si002629m.g N
Si004558m.g Setaria italica Si004558m.g N
Si022874m.g Setaria italica Si022874m.g I
TCM_037728 Theobroma cacao TCM_037728 I
TRAES3BF016200140CFD_g Triticum aestivum TRAES3BF016200140CFD_g N
Traes_3AL_7C031019E Triticum aestivum Traes_3AL_7C031019E N
Traes_5BL_C1D4586B1 Triticum aestivum Traes_5BL_C1D4586B1 I
TRIUR3_05615 Triticum urartu TRIUR3_05615 N
TRIUR3_25771 Triticum urartu TRIUR3_25771 N
VIT_11s0016g02780 Vitis vinifera VIT_11s0016g02780 I