CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ea02676
(
Panicum virgatum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pavir.Ea02676
T289136_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ea02676.1.p
Myb
14
62
RGPWSQEEDAILRSFVQRFGNAGNWIALPHKAGLKRCGKSCRLRWLNYL
Pavir.Ea02676.1.p
Myb
68
113
HGGFTDQEDDLILSLYGDIGSKWSVIASRLPGRTDNDVKNYWNTKL
Links
Other
Myb/SANT
family TFs
Other
Panicum virgatum
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G024550
Zea mays
GRMZM2G024550
N
OLONG_019354
Oryza longistaminata
OLONG_019354
N
ORGLA02G0199200
Oryza glaberrima
ORGLA02G0199200
N
Pavir.J28752
Panicum virgatum
Pavir.J28752
N
Sb04g025195
Sorghum bicolor
Sb04g025195
N