CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Fa00215
(
Panicum virgatum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pavir.Fa00215
T289175_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Fa00215.1.p
Myb
14
61
RGPWTAEEDKKLISFILTHGRCCWRAVPKLAGLLRCGKSCRLRWTNYL
Pavir.Fa00215.1.p
Myb
67
93
RGLLSTAEEQLVIDLHAKLGNRYTSLH
Links
Other
Myb/SANT
family TFs
Other
Panicum virgatum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_093710
Aspergillus clavatus
CADACLAG00008309
N
0.000
CADAFLAG00001131
Aspergillus flavus
CADAFLAG00001131
N
0.000
AFUA_2G00360
Aspergillus fumigatus
CADAFUAG00003431
N
0.000
ANIA_10334
Aspergillus nidulans
CADANIAG00010424
N
0.000
CADAORAG00003024
Aspergillus oryzae
CADAORAG00003024
N
0.000
NFIA_032520
Neosartorya fischeri
CADNFIAG00002979
N
0.000
ENSLOCG00000006946
Lepisosteus oculatus
ENSLOCG00000006946
I
0.000
ENSMEUG00000014864
Macropus eugenii
ENSMEUG00000014864
I
0.000
ENSONIG00000016567
Oreochromis niloticus
ENSONIG00000016567
I
0.000
ENSTNIG00000000637
Tetraodon nigroviridis
ENSTNIG00000000637
I
0.000
HDID_0000776001
Hymenolepis diminuta
HDID_0000776001
I
0.000
LOAG_18384
Loa loa
LOAG_18384
N
0.000
nDi.2.2.2.g04928
Dirofilaria immitis
nDi.2.2.2.g04928
N
0.000
irx1.L
Xenopus laevis
XB-GENE-865648
I
0.000