chr2.CM0021.770.nc (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 chr2.CM0021.770.nc T290677_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
APRR2
M02300_2.00 		Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN		 PBM
Weirauch et al.(2014)
pTH7102 		0.783 0.894
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr2.CM0021.770.nc Myb 313 363

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29738.m001043 Ricinus communis 29738.m001043 I 0.000
AMTR_s00009p00242790 Amborella trichopoda AMTR_s00009p00242790 I 0.000
AMTR_s00101p00150740 Amborella trichopoda AMTR_s00101p00150740 I 0.000
Aquca_002_01095 Aquilegia coerulea Aquca_002_01095 I 0.000
BGIOSGA003819 Oryza indica BGIOSGA003819 N 0.000
BGIOSGA003821 Oryza indica BGIOSGA003821 N 0.000
BGIOSGA014565 Oryza indica BGIOSGA014565 N 0.000
BGIOSGA014566 Oryza indica BGIOSGA014566 N 0.000
BGIOSGA014567 Oryza indica BGIOSGA014567 N 0.000
BGIOSGA015472 Oryza indica BGIOSGA015472 N 0.000
BRADI3G54070 Brachypodium distachyon BRADI3G54070 I 0.000
cassava16550.m1 Manihot esculenta cassava16550.m1 I 0.000
cassava46299.m1 Manihot esculenta cassava46299.m1 I 0.000
Ca_08440 Cicer arietinum Ca_08440 I 0.000
Ciclev10031900m.g Citrus clementina Ciclev10031900m.g I 0.000
Cla020671 Citrullus lanatus Cla020671 I 0.000
Cucsa.283920 Cucumis sativus Cucsa.283920 I 0.000
Eucgr.G02351 Eucalyptus grandis Eucgr.G02351 I 0.000
evm.TU.supercontig_53.118 Carica papaya evm.TU.supercontig_53.118 I 0.000
F775_10624 Aegilops tauschii F775_10624 N 0.000
F775_11347 Aegilops tauschii F775_11347 I 0.000
F775_18830 Aegilops tauschii F775_18830 N 0.000
F775_19744 Aegilops tauschii F775_19744 N 0.000
GLYMA10G34910 Glycine max GLYMA10G34910 I 0.000
GLYMA20G32660 Glycine max GLYMA20G32660 I 0.000
Gorai.008G186700 Gossypium raimondii Gorai.008G186700 I 0.000
Gorai.013G079600 Gossypium raimondii Gorai.013G079600 I 0.000
GRMZM2G172795 Zea mays GRMZM2G172795 I 0.000
GSMUA_Achr11G13440_001 Musa acuminata GSMUA_Achr11G13440_001 I 0.000
GSMUA_Achr11G21270_001 Musa acuminata GSMUA_Achr11G21270_001 I 0.000
GSMUA_Achr1G21280_001 Musa acuminata GSMUA_Achr1G21280_001 I 0.000
GSMUA_Achr5G20600_001 Musa acuminata GSMUA_Achr5G20600_001 N 0.000
LPERR04G17380 Leersia perrieri LPERR04G17380 N 0.000
LPERR04G17390 Leersia perrieri LPERR04G17390 N 0.000
LPERR04G17400 Leersia perrieri LPERR04G17400 I 0.000
LPERR08G11070 Leersia perrieri LPERR08G11070 N 0.000
Lus10021711.g Linum usitatissimum Lus10021711.g I 0.000
Lus10035056.g Linum usitatissimum Lus10035056.g I 0.000
MDP0000271420 Malus domestica MDP0000271420 I 0.000
MDP0000319726 Malus domestica MDP0000319726 I 0.000
mgf017635m Mimulus guttatus mgf017635m I 0.000
MLOC_38470 Hordeum vulgare MLOC_38470 N 0.000
MTR_1g093750 Medicago truncatula MTR_1g093750 I 0.000
OB01G30110 Oryza brachyantha OB01G30110 N 0.000
OB04G28350 Oryza brachyantha OB04G28350 N 0.000
OB04G28380 Oryza brachyantha OB04G28380 N 0.000
OB04G28390 Oryza brachyantha OB04G28390 N 0.000
OBART01G20350 Oryza barthii OBART01G20350 N 0.000
OBART04G21320 Oryza barthii OBART04G21320 N 0.000
OBART04G21370 Oryza barthii OBART04G21370 N 0.000
OGLUM01G23970 Oryza glumaepatula OGLUM01G23970 N 0.000
OGLUM04G21260 Oryza glumaepatula OGLUM04G21260 N 0.000
OGLUM04G21350 Oryza glumaepatula OGLUM04G21350 N 0.000
OLONG_009946 Oryza longistaminata OLONG_009946 N 0.000
OLONG_016958 Oryza longistaminata OLONG_016958 N 0.000
OLONG_016960 Oryza longistaminata OLONG_016960 N 0.000
OMERI01G18770 Oryza meridionalis OMERI01G18770 N 0.000
OMERI01G18860 Oryza meridionalis OMERI01G18860 N 0.000
OMERI04G17790 Oryza meridionalis OMERI04G17790 N 0.000
OMERI04G17820 Oryza meridionalis OMERI04G17820 N 0.000
ONIVA01G22920 Oryza nivara ONIVA01G22920 N 0.000
ONIVA01G22980 Oryza nivara ONIVA01G22980 N 0.000
ONIVA04G19650 Oryza nivara ONIVA04G19650 N 0.000
ONIVA04G19860 Oryza nivara ONIVA04G19860 N 0.000
OPUNC04G19030 Oryza punctata OPUNC04G19030 N 0.000
OPUNC04G19040 Oryza punctata OPUNC04G19040 N 0.000
orange1.1g037785m.g Citrus sinensis orange1.1g037785m.g I 0.000
ORGLA04G0183800 Oryza glaberrima ORGLA04G0183800 N 0.000
ORGLA04G0183900 Oryza glaberrima ORGLA04G0183900 N 0.000
ORGLA11G0077500 Oryza glaberrima ORGLA11G0077500 N 0.000
ORUFI01G23050 Oryza rufipogon ORUFI01G23050 N 0.000
ORUFI04G22890 Oryza rufipogon ORUFI04G22890 N 0.000
ORUFI04G22910 Oryza rufipogon ORUFI04G22910 N 0.000
ORUFI11G09150 Oryza rufipogon ORUFI11G09150 N 0.000
OS04G0557200 Oryza sativa OS04G0557200 N 0.000
OS04G0557800 Oryza sativa OS04G0557800 N 0.000
Pavir.Cb00833 Panicum virgatum Pavir.Cb00833 N 0.000
Pavir.J34298 Panicum virgatum Pavir.J34298 N 0.000
PGSC0003DMG400007457 Solanum tuberosum PGSC0003DMG400007457 I 0.000
PK07858.1 Cannabis sativa PK07858.1 D 0.000
Pm029004 Prunus mume Pm029004 I 0.000
POPTR_0008s11490 Populus trichocarpa POPTR_0008s11490 I 0.000
POPTR_0010s14010 Populus trichocarpa POPTR_0010s14010 I 0.000
PRUPE_ppa019406mg Prunus persica PRUPE_ppa019406mg I 0.000
SapurV1A.0079s0530 Salix purpurea SapurV1A.0079s0530 I 0.000
SapurV1A.0304s0070 Salix purpurea SapurV1A.0304s0070 I 0.000
SapurV1A.3056s0010 Salix purpurea SapurV1A.3056s0010 I 0.000
Sb06g025040 Sorghum bicolor Sb06g025040 I 0.000
Sb06g025060 Sorghum bicolor Sb06g025060 I 0.000
SELMODRAFT_46532 Selaginella moellendorffii SELMODRAFT_46532 I 0.000
SELMODRAFT_56610 Selaginella moellendorffii SELMODRAFT_56610 I 0.000
Si000845m.g Setaria italica Si000845m.g I 0.000
Si012401m.g Setaria italica Si012401m.g I 0.000
TCM_011873 Theobroma cacao TCM_011873 I 0.000
Traes_2AL_4F71A8FB4 Triticum aestivum Traes_2AL_4F71A8FB4 N 0.000
Traes_6BL_AEB13ECDE Triticum aestivum Traes_6BL_AEB13ECDE I 0.000
TRIUR3_18279 Triticum urartu TRIUR3_18279 N 0.000
TRIUR3_26157 Triticum urartu TRIUR3_26157 N 0.000
TRIUR3_35186 Triticum urartu TRIUR3_35186 N 0.000
VIT_01s0011g02940 Vitis vinifera VIT_01s0011g02940 I 0.000