Bo3g002800 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo3g002800 T292340_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC078
M02372_2.00 		Arabidopsis thaliana
NNRCAMGHMANN
NNTKDCKTGYNN		 PBM
Weirauch et al.(2014)
pTH7209 		0.959 0.965
NAC078
M07226_2.00 		Arabidopsis thaliana
TTDCTTGNDNNDCAAG
CTTGHNNHNCAAGHAA		 Dap-seq
OMalley et al.(2016)
NAC2_colamp_a 		0.959 0.965
NAC078
M07227_2.00 		Arabidopsis thaliana
DTTWCTTGNNNNRCAAG
CTTGYNNNNCAAGWAAH		 Dap-seq
OMalley et al.(2016)
NAC2_col_v3a 		0.959 0.965
NAC078
M11083_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC078_Q2 		0.959 0.965
NAC053
M07202_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAG
CTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_colamp_a 		0.952 0.947
NAC053
M07203_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAGH
DCTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_col 		0.952 0.947
NAC053
M11079_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G10500_Q2 		0.952 0.947
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g002800.1 NAC/NAM 10 136

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29598.m000468 Ricinus communis 29598.m000468 I
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I
BGIOSGA006734 Oryza indica BGIOSGA006734 I
BGIOSGA007649 Oryza indica BGIOSGA007649 I
BGIOSGA020738 Oryza indica BGIOSGA020738 I
BGIOSGA020743 Oryza indica BGIOSGA020743 I
Bra010010 Brassica rapa Bra010010 I
cassava18832.valid.m1 Manihot esculenta cassava18832.valid.m1 I
cassava18833.valid.m1 Manihot esculenta cassava18833.valid.m1 I
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I
cassava36728.valid.m1 Manihot esculenta cassava36728.valid.m1 N
Ca_03753 Cicer arietinum Ca_03753 I
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I
Cla015037 Citrullus lanatus Cla015037 I
Cla020112 Citrullus lanatus Cla020112 I
Cucsa.133290 Cucumis sativus Cucsa.133290 I
Cucsa.388800 Cucumis sativus Cucsa.388800 I
Eucgr.B01486 Eucalyptus grandis Eucgr.B01486 N
BZO2H3 Arabidopsis lyrata fgenesh2_kg.6__2797__AT5G28770.2 I
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I
GLYMA03G40730 Glycine max GLYMA03G40730 I
GLYMA19G43420 Glycine max GLYMA19G43420 I
Gorai.004G075400 Gossypium raimondii Gorai.004G075400 I
Gorai.004G218300 Gossypium raimondii Gorai.004G218300 I
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I
Gorai.007G141500 Gossypium raimondii Gorai.007G141500 I
GRMZM2G098904 Zea mays GRMZM2G098904 I
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I
LPERR02G04950 Leersia perrieri LPERR02G04950 I
LPERR06G19690 Leersia perrieri LPERR06G19690 I
Lus10006590.g Linum usitatissimum Lus10006590.g I
Lus10015913.g Linum usitatissimum Lus10015913.g I
Lus10018759.g Linum usitatissimum Lus10018759.g I
MDP0000176747 Malus domestica MDP0000176747 I
MDP0000270365 Malus domestica MDP0000270365 I
mgf009803m Mimulus guttatus mgf009803m I
mgf012838m Mimulus guttatus mgf012838m I
OB06G31430 Oryza brachyantha OB06G31430 I
OBART02G05680 Oryza barthii OBART02G05680 I
OBART02G11580 Oryza barthii OBART02G11580 I
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I
OMERI02G06470 Oryza meridionalis OMERI02G06470 I
OMERI02G12230 Oryza meridionalis OMERI02G12230 I
OMERI06G23650 Oryza meridionalis OMERI06G23650 I
ONIVA02G06040 Oryza nivara ONIVA02G06040 I
ONIVA02G12920 Oryza nivara ONIVA02G12920 I
ONIVA06G27820 Oryza nivara ONIVA06G27820 I
OPUNC02G10230 Oryza punctata OPUNC02G10230 I
OPUNC06G21410 Oryza punctata OPUNC06G21410 I
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I
ORGLA06G0198800 Oryza glaberrima ORGLA06G0198800 I
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I
ORUFI06G25410 Oryza rufipogon ORUFI06G25410 I
OS02G0175100 Oryza sativa OS02G0175100 I
OS02G0266800 Oryza sativa OS02G0266800 D
OS06G0662200 Oryza sativa OS06G0662200 I
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I
PDK_20s1417191g003 Phoenix dactylifera PDK_20s1417191g003 I
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I
PK05128.1 Cannabis sativa PK05128.1 D
PK11472.1 Cannabis sativa PK11472.1 I
Pm005087 Prunus mume Pm005087 I
Pm020231 Prunus mume Pm020231 I
POPTR_0002s04660 Populus trichocarpa POPTR_0002s04660 I
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I
PRUPE_ppa005367mg Prunus persica PRUPE_ppa005367mg I
PRUPE_ppa007814mg Prunus persica PRUPE_ppa007814mg I
SapurV1A.0006s1330 Salix purpurea SapurV1A.0006s1330 I
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I
SapurV1A.0860s0020 Salix purpurea SapurV1A.0860s0020 N
SapurV1A.2969s0020 Salix purpurea SapurV1A.2969s0020 N
Sb04g005020 Sorghum bicolor Sb04g005020 I
Si017778m.g Setaria italica Si017778m.g I
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I
TCM_004222 Theobroma cacao TCM_004222 I
TCM_026349 Theobroma cacao TCM_026349 I
BZO2H3 Vitis vinifera VIT_14s0030g02200 I