CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra010362
(
Brassica rapa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bra010362
T292569_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra010362.1-P
NAC/NAM
11
151
PPGFRFHPSDEELVCHYLCNKIRAKSLHCNVEDDDVDEALQDATDLVEIDLHICEPWQLPDVAKLNAKEWYFFSFRDRKYCTGYRTNRATVSGYWKATGKDRTVIDPRTRQLVGMRKTLVFYRNRAPHGIKTTWIMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Brassica rapa
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27446.m000475
Ricinus communis
27446.m000475
I
0.000
AMTR_s00026p00180130
Amborella trichopoda
AMTR_s00026p00180130
I
0.000
ERF084
Arabidopsis thaliana
AT1G80580
N
0.000
BGIOSGA019608
Oryza indica
BGIOSGA019608
N
0.000
Bo2g095830
Brassica oleracea
Bo2g095830
N
0.000
Bra008460
Brassica rapa
Bra008460
N
0.000
BRADI3G18070
Brachypodium distachyon
BRADI3G18070
I
0.000
Cagra.1725s0082
Capsella grandiflora
Cagra.1725s0082
N
0.000
Carubv10022119m.g
Capsella rubella
Carubv10022119m.g
N
0.000
cassava38416.m1
Manihot esculenta
cassava38416.m1
I
0.000
Ca_20041
Cicer arietinum
Ca_20041
I
0.000
Ciclev10027171m.g
Citrus clementina
Ciclev10027171m.g
I
0.000
Cla015583
Citrullus lanatus
Cla015583
I
0.000
Cucsa.105790
Cucumis sativus
Cucsa.105790
I
0.000
Eucgr.F03941
Eucalyptus grandis
Eucgr.F03941
N
0.000
evm.TU.supercontig_10.125
Carica papaya
evm.TU.supercontig_10.125
I
0.000
e_gw1.14.213.1
Physcomitrella patens
e_gw1.14.213.1
N
0.000
e_gw1.145.79.1
Physcomitrella patens
e_gw1.145.79.1
N
0.000
e_gw1.15.234.1
Physcomitrella patens
e_gw1.15.234.1
N
0.000
e_gw1.276.69.1
Physcomitrella patens
e_gw1.276.69.1
N
0.000
fgenesh1_pg.scaffold_23000002
Physcomitrella patens
fgenesh1_pg.scaffold_23000002
I
0.000
fgenesh1_pm.C_scaffold_2001935
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_2001935
N
0.000
gene15953-v1.0-hybrid
Fragaria vesca
gene15953-v1.0-hybrid
I
0.000
GLYMA07G03041
Glycine max
GLYMA07G03041
I
0.000
GLYMA08G23074
Glycine max
GLYMA08G23074
I
0.000
Gorai.006G107500
Gossypium raimondii
Gorai.006G107500
I
0.000
Gorai.009G125700
Gossypium raimondii
Gorai.009G125700
N
0.000
GSMUA_Achr1G25890_001
Musa acuminata
GSMUA_Achr1G25890_001
I
0.000
gw1.204.54.1
Physcomitrella patens
gw1.204.54.1
N
0.000
gw1.340.39.1
Physcomitrella patens
gw1.340.39.1
N
0.000
Lus10014345.g
Linum usitatissimum
Lus10014345.g
N
0.000
Lus10026053.g
Linum usitatissimum
Lus10026053.g
N
0.000
MDP0000264187
Malus domestica
MDP0000264187
I
0.000
mgf023662m
Mimulus guttatus
mgf023662m
I
0.000
MTR_4g009260
Medicago truncatula
MTR_4g009260
I
0.000
OMERI05G10040
Oryza meridionalis
OMERI05G10040
N
0.000
ONIVA05G11840
Oryza nivara
ONIVA05G11840
N
0.000
orange1.1g047950m.g
Citrus sinensis
orange1.1g047950m.g
I
0.000
ORUFI05G12300
Oryza rufipogon
ORUFI05G12300
N
0.000
OS05G0316800
Oryza sativa
OS05G0316800
N
0.000
Pavir.Fa01730
Panicum virgatum
Pavir.Fa01730
I
0.000
Pavir.Fb00952
Panicum virgatum
Pavir.Fb00952
I
0.000
Pavir.Fb01486
Panicum virgatum
Pavir.Fb01486
I
0.000
PGSC0003DMG400000091
Solanum tuberosum
PGSC0003DMG400000091
I
0.000
PGSC0003DMG400010135
Solanum tuberosum
PGSC0003DMG400010135
N
0.000
Pm013734
Prunus mume
Pm013734
I
0.000
POPTR_0001s32050
Populus trichocarpa
POPTR_0001s32050
I
0.000
POPTR_0013s15440
Populus trichocarpa
POPTR_0013s15440
I
0.000
POPTR_0017s08090
Populus trichocarpa
POPTR_0017s08090
I
0.000
PRUPE_ppa020928mg
Prunus persica
PRUPE_ppa020928mg
I
0.000
SapurV1A.0058s0710
Salix purpurea
SapurV1A.0058s0710
I
0.000
SapurV1A.1000s0130
Salix purpurea
SapurV1A.1000s0130
I
0.000
SELMODRAFT_412693
Selaginella moellendorffii
SELMODRAFT_412693
N
0.000
SELMODRAFT_417258
Selaginella moellendorffii
SELMODRAFT_417258
N
0.000
SELMODRAFT_428344
Selaginella moellendorffii
SELMODRAFT_428344
N
0.000
SELMODRAFT_428599
Selaginella moellendorffii
SELMODRAFT_428599
N
0.000
Solyc01g095500.2
Solanum lycopersicum
Solyc01g095500.2
I
0.000
Solyc03g117230.1
Solanum lycopersicum
Solyc03g117230.1
N
0.000
TCM_027348
Theobroma cacao
TCM_027348
I
0.000
Thhalv10000556m.g
Eutrema salsugineum
Thhalv10000556m.g
N
0.000
Thhalv10019474m.g
Eutrema salsugineum
Thhalv10019474m.g
N
0.000
VIT_09s0002g08830
Vitis vinifera
VIT_09s0002g08830
I
0.000