CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb05g001590
(
Sorghum bicolor
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Sb05g001590
T295549_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb05g001590.1
NAC/NAM
17
143
PPGFRFHPTDEEVITSYLLQKFLNPSFAPHAIGEVDLNKCEPWDLPSKANMGEKEWYFFCHKDMKYPTGTRTNRATKEGYWKATGKDREIFKQPGRELVGMKKTLVFYMGRAPRGTKTNWVMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Sorghum bicolor
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA034716
Oryza indica
BGIOSGA034716
N
0.908
Ca_08255
Cicer arietinum
Ca_08255
I
0.874
chr1.CM0104.260.nc
Lotus japonicus
chr1.CM0104.260.nc
I
0.876
Eucgr.A02074
Eucalyptus grandis
Eucgr.A02074
I
0.877
Eucgr.K01472
Eucalyptus grandis
Eucgr.K01472
I
0.881
F775_26964
Aegilops tauschii
F775_26964
N
0.956
GLYMA16G04720
Glycine max
GLYMA16G04720
I
0.874
GLYMA19G28515
Glycine max
GLYMA19G28515
I
0.874
GRMZM2G018436
Zea mays
GRMZM2G018436
N
0.948
GRMZM6G257110
Zea mays
GRMZM6G257110
N
0.930
MLOC_5832
Hordeum vulgare
MLOC_5832
N
0.949
OBART11G01610
Oryza barthii
OBART11G01610
N
0.908
OGLUM11G01340
Oryza glumaepatula
OGLUM11G01340
N
0.908
OPUNC11G01340
Oryza punctata
OPUNC11G01340
N
0.909
OS11G0127600
Oryza sativa
OS11G0127600
N
0.908
Pavir.J21394
Panicum virgatum
Pavir.J21394
I
0.955
Pavir.J39049
Panicum virgatum
Pavir.J39049
I
0.955
Si010417m.g
Setaria italica
Si010417m.g
N
0.939
Traes_5BL_420974D47
Triticum aestivum
Traes_5BL_420974D47
N
0.949
TRIUR3_14541
Triticum urartu
TRIUR3_14541
N
0.949