CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si010417m.g
(
Setaria italica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Si010417m.g
T295702_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si010417m
NAC/NAM
17
148
PPGFRFHPTDEEVITSYLLEKFLNPSFDPQAIGEVDLNKCEPWDLPSKAKMGEKEWFFFCHKDMKYPTGMRTNRATKEGYWKATGKDREIFKPAAAAGAGRELVGMKKTLVFYMGRAPRGSKTNWVMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Setaria italica
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
STOP1
Arabidopsis thaliana
AT1G34370
D
0.000
Bo8g027000
Brassica oleracea
Bo8g027000
I
0.000
Bostr.1040s0032
Boechera stricta
Bostr.1040s0032
I
0.000
Cagra.12398s0002
Capsella grandiflora
Cagra.12398s0002
I
0.000
Carubv10008876m.g
Capsella rubella
Carubv10008876m.g
I
0.000
cassava22193.valid.m1
Manihot esculenta
cassava22193.valid.m1
I
0.000
cassava24483.valid.m1
Manihot esculenta
cassava24483.valid.m1
I
0.000
Ca_04300
Cicer arietinum
Ca_04300
I
0.000
Ciclev10000850m.g
Citrus clementina
Ciclev10000850m.g
I
0.000
Cla016623
Citrullus lanatus
Cla016623
I
0.000
Cucsa.079940
Cucumis sativus
Cucsa.079940
I
0.000
Eucgr.F02627
Eucalyptus grandis
Eucgr.F02627
I
0.000
STOP1
Arabidopsis lyrata
fgenesh2_kg.1__3547__AT1G34370.2
I
0.000
gene27486-v1.0-hybrid
Fragaria vesca
gene27486-v1.0-hybrid
I
0.000
Gorai.006G131700
Gossypium raimondii
Gorai.006G131700
I
0.000
GSMUA_Achr5G01170_001
Musa acuminata
GSMUA_Achr5G01170_001
I
0.000
MDP0000141403
Malus domestica
MDP0000141403
I
0.000
MDP0000199559
Malus domestica
MDP0000199559
I
0.000
MDP0000551046
Malus domestica
MDP0000551046
I
0.000
MDP0000807856
Malus domestica
MDP0000807856
I
0.000
mgf000060m
Mimulus guttatus
mgf000060m
I
0.000
orange1.1g009831m.g
Citrus sinensis
orange1.1g009831m.g
I
0.000
Pavir.J06328
Panicum virgatum
Pavir.J06328
I
0.000
Pavir.J12018
Panicum virgatum
Pavir.J12018
I
0.000
PGSC0003DMG400009234
Solanum tuberosum
PGSC0003DMG400009234
I
0.000
PGSC0003DMG400026081
Solanum tuberosum
PGSC0003DMG400026081
I
0.000
PK23301.1
Cannabis sativa
PK23301.1
I
0.000
Pm022201
Prunus mume
Pm022201
I
0.000
PRUPE_ppa004510mg
Prunus persica
PRUPE_ppa004510mg
I
0.000
Solyc06g065440.1
Solanum lycopersicum
Solyc06g065440.1
I
0.000
Solyc11g017140.1
Solanum lycopersicum
Solyc11g017140.1
I
0.000
TCM_036719
Theobroma cacao
TCM_036719
I
0.000
Thhalv10007411m.g
Eutrema salsugineum
Thhalv10007411m.g
I
0.000
STOP1
Vitis vinifera
VIT_18s0072g00840
I
0.000