CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cucsa.228480
(
Cucumis sativus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Cucsa.228480
T296990_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.228480.1
NAC/NAM
16
142
PPGLRFCPTDEDLVLHFLYHKANSHHRFSNSIIIPHLQLHLYNPWQFHGKTLSNGDIHYFFSRVGESRATESGYWKDVLMDEPIFCGANGDEVGIKKYHIFFVGDQEEDDESPTPIQTSWVMQEYHI
Cucsa.228480.2
NAC/NAM
3
83
AVGKTLSNGDIHYFFSRVGESRATESGYWKDVLMDEPIFCGANGDEVGIKKYHIFFVGDQEEDDESPTPIQTSWVMQEYHI
Links
Other
NAC/NAM
family TFs
Other
Cucumis sativus
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29992.m001406
Ricinus communis
29992.m001406
I
0.883
evm.TU.supercontig_42.167
Carica papaya
evm.TU.supercontig_42.167
N
0.897
GLYMA05G32590
Glycine max
GLYMA05G32590
I
0.895
PK25436.1
Cannabis sativa
PK25436.1
N
0.909
PRUPE_ppa019007mg
Prunus persica
PRUPE_ppa019007mg
I
0.893